Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0705 |
Symbol | |
ID | 3760996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 775797 |
End bp | 776441 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637785418 |
Product | HAD family hydrolase |
Protein accession | YP_390975 |
Protein GI | 78485050 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.399525 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTCAG AGGCGCGTAT CGTTTCTTCG ATACAGATTG CTGCCAAAAG AGCAAACTAC CCAGTGCTGC CTTATGATGT TTCAAAACAG ATTATTGGGT TAAGCTTGGA GAAAGCGATT TTGACCCTTT ATCCTGAAGC AGATGACGCA GGTATAAAAG CTATTTCAGA AGGGTATACT CAGTGTTTCC TAGAGGAGTC GGATGTTCCG ATGTTGCCTT TTGATGGGGC TGAAAGATTG TTAAAGTCTT TAAAATCTCA AGGTACTAAG CTGGCGATTG CCACGGGGAA AAGTCGACGT GGATTGGATC AAGTGCTGGA TGAGGTTGGG TTTGTTGACT ATTTTGATCT GACGCGGACG CCTGTCGAGT CGGAATCGAA ACCGAGCCCG TTGATGTTAC AACAAATTTT AGAGGCATTT TCATTGGAGC CTGAACAAGC GGTAATGATT GGTGATACTG AGTTTGATAT GCAGATGGCG TCCGCTATTC AAATGGATCG CGTAGCGTTA AGTCATGGCG TGCATGAATT AGAGCGCTTG CAGTCTTTTG ATCCGGTGGC TTGTTTCGAT GACCTGCATG CGATGCATGC TTGGTTGGTT AATAATATTG TGCCGCACGA AGTTAAAAAT ATTAAAGAAG GTTAG
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Protein sequence | MDSEARIVSS IQIAAKRANY PVLPYDVSKQ IIGLSLEKAI LTLYPEADDA GIKAISEGYT QCFLEESDVP MLPFDGAERL LKSLKSQGTK LAIATGKSRR GLDQVLDEVG FVDYFDLTRT PVESESKPSP LMLQQILEAF SLEPEQAVMI GDTEFDMQMA SAIQMDRVAL SHGVHELERL QSFDPVACFD DLHAMHAWLV NNIVPHEVKN IKEG
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