Gene Tcr_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0623 
Symbol 
ID3760345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand+ 
Start bp697207 
End bp697848 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content41% 
IMG OID637785336 
Producthypothetical protein 
Protein accessionYP_390893 
Protein GI78484968 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTT ACGAAACCGA TGAAGAACAA GTTGAAGCCA TTAAGAGTTG GTGGAAAAAA 
AATGGAACGC AATTATTATC GGGTATTTTA GTCATTGTTC TGGCCTGGAC AGGCTGGACA 
TATTGGCAAA ATACTCAAAC GACTAAAGCC TTGAATGCGT CGGCTGTTTT TGAAGTGATG 
CAAGTAAAGC AAAGCCAAAA TGCACTTGGT GATGTTTTGA GAGACGGCCT GAAGTTAATG 
GAAGAGCAAC CAGATAGCCC TTATGCTTCT GGTGTGGCTT TGATGATTGC TAAGCATTAT 
TTTGATGAGA AGGCTTTCGA TAAAGCGATT GAAAATTATC AATGGACAAT TGAGCATGCG 
CCGGATCACT CAATTCAACT GATTGCTCGG TTACGATTAG TAACGGTTTA TGTGCAGGAA 
AAAATGTTTG AAAAAGCCGA TCAAGTTTTG GCTGGCGTTG ATCAGAAAGC ATTAAGTTTG 
GCCGAAAAAG GGAATTATGA TTTTCAAGTA GCGGAATTGG CGTTAACCGA AGGTGATTTG 
TCACAAGCCA AAGAGGCTTA TAATCGCGTC ATTTCAAATG CAGAGGCGCC AGAAAGTGTG 
CAAAATTTGG CCAGACTGAA ATTAGCTGAC TTGGCAGGGT AA
 
Protein sequence
MSRYETDEEQ VEAIKSWWKK NGTQLLSGIL VIVLAWTGWT YWQNTQTTKA LNASAVFEVM 
QVKQSQNALG DVLRDGLKLM EEQPDSPYAS GVALMIAKHY FDEKAFDKAI ENYQWTIEHA 
PDHSIQLIAR LRLVTVYVQE KMFEKADQVL AGVDQKALSL AEKGNYDFQV AELALTEGDL 
SQAKEAYNRV ISNAEAPESV QNLARLKLAD LAG