Gene Tcr_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0575 
Symbol 
ID3762400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp649449 
End bp650255 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content43% 
IMG OID637785288 
Producthypothetical protein 
Protein accessionYP_390845 
Protein GI78484920 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACT GGTTTCTCAA CCCACCCTTA TTTATACAGC TCGCTTTTTT AGGCGGAATA 
CTAATCGCAT TAATTGCAGC CCCTCTGGGC GTTTTCATGG TTTGGCAAAA GCAATCATAC
TTCGGTGCGG CGCTAGCGCA TTCCGCACTT TTAGGCGTCA GCTTTGGGTT GCTGATTGAA
CTTAACCTAA CACTGGCGGT GGTTTTGATT TCACTGGGAG TTGCGCTCGG CATCCATTTT
TTAAAAGAAA AAACACGGCT ATCATCAGAC ACCTTACTTG GCATTCTGGC ACACAGCACC
CTCGCCATTG GGTTGATAAT CCTTAGTCTG CAATCACACG TTCAAATTGA TATTTTTTCT
TACCTATTTG GAGACATCCT CAGCATTGAC TCGATGGATT TAAATTTCAT CCTATTGCTA
GGGGGGCTGG TCAGTCTATT TTTCTGGTTT CACTGGCATG ACTTACTCAA CACGACACTG
AATGCAGAGC TTGCCCAAAT AGAAGGGATT CCGACCCAAA AAGTTCAGCT TTACTATGTT
CTGTTACTTG CTTTACTCAT TGCCGTCGCG ATGAAAATCG TTGGGGTTCT ATTGATTACA
TCTTTATTGA TTATCCCCGC CGCCGCCGCC AGAAAATTCT CAAATTCGCC AGAACGGATG
TTAACTTTCA GCATGGTGTT TGGTTTTATA TCGGTCTTAT TCGGTTTATT AAGTTCTATT
TTTTGGGATT TACCTACCGG CCCCAGCATT GTTGCCATTG CGACAGTGAT TTTCTTAGTC
AGTTTATTCA AAAAAGAAAC CTGTTAA
 
Protein sequence
MTDWFLNPPL FIQLAFLGGI LIALIAAPLG VFMVWQKQSY FGAALAHSAL LGVSFGLLIE 
LNLTLAVVLI SLGVALGIHF LKEKTRLSSD TLLGILAHST LAIGLIILSL QSHVQIDIFS
YLFGDILSID SMDLNFILLL GGLVSLFFWF HWHDLLNTTL NAELAQIEGI PTQKVQLYYV
LLLALLIAVA MKIVGVLLIT SLLIIPAAAA RKFSNSPERM LTFSMVFGFI SVLFGLLSSI
FWDLPTGPSI VAIATVIFLV SLFKKETC