Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0575 |
Symbol | |
ID | 3762400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 649449 |
End bp | 650255 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637785288 |
Product | hypothetical protein |
Protein accession | YP_390845 |
Protein GI | 78484920 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGACT GGTTTCTCAA CCCACCCTTA TTTATACAGC TCGCTTTTTT AGGCGGAATA CTAATCGCAT TAATTGCAGC CCCTCTGGGC GTTTTCATGG TTTGGCAAAA GCAATCATAC TTCGGTGCGG CGCTAGCGCA TTCCGCACTT TTAGGCGTCA GCTTTGGGTT GCTGATTGAA CTTAACCTAA CACTGGCGGT GGTTTTGATT TCACTGGGAG TTGCGCTCGG CATCCATTTT TTAAAAGAAA AAACACGGCT ATCATCAGAC ACCTTACTTG GCATTCTGGC ACACAGCACC CTCGCCATTG GGTTGATAAT CCTTAGTCTG CAATCACACG TTCAAATTGA TATTTTTTCT TACCTATTTG GAGACATCCT CAGCATTGAC TCGATGGATT TAAATTTCAT CCTATTGCTA GGGGGGCTGG TCAGTCTATT TTTCTGGTTT CACTGGCATG ACTTACTCAA CACGACACTG AATGCAGAGC TTGCCCAAAT AGAAGGGATT CCGACCCAAA AAGTTCAGCT TTACTATGTT CTGTTACTTG CTTTACTCAT TGCCGTCGCG ATGAAAATCG TTGGGGTTCT ATTGATTACA TCTTTATTGA TTATCCCCGC CGCCGCCGCC AGAAAATTCT CAAATTCGCC AGAACGGATG TTAACTTTCA GCATGGTGTT TGGTTTTATA TCGGTCTTAT TCGGTTTATT AAGTTCTATT TTTTGGGATT TACCTACCGG CCCCAGCATT GTTGCCATTG CGACAGTGAT TTTCTTAGTC AGTTTATTCA AAAAAGAAAC CTGTTAA
|
Protein sequence | MTDWFLNPPL FIQLAFLGGI LIALIAAPLG VFMVWQKQSY FGAALAHSAL LGVSFGLLIE LNLTLAVVLI SLGVALGIHF LKEKTRLSSD TLLGILAHST LAIGLIILSL QSHVQIDIFS YLFGDILSID SMDLNFILLL GGLVSLFFWF HWHDLLNTTL NAELAQIEGI PTQKVQLYYV LLLALLIAVA MKIVGVLLIT SLLIIPAAAA RKFSNSPERM LTFSMVFGFI SVLFGLLSSI FWDLPTGPSI VAIATVIFLV SLFKKETC
|
| |