Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0557 |
Symbol | |
ID | 3762377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | - |
Start bp | 626951 |
End bp | 627466 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637785270 |
Product | hypothetical protein |
Protein accession | YP_390827 |
Protein GI | 78484902 |
COG category | [S] Function unknown |
COG ID | [COG3216] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.235942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCCGTT ATATCAAACT CCAAATCCAT AAAATCGGTC GCAAAACAAA AATGTCTCCC TTTCTAAACA GGTATTTTCC TCGTTTTAAA GACAACGTTT ATTGGTTTGG CGATCGAAAA TCATTCGCAA GAGCGGGCTT TATCGGCGCT TTCTGTATGA TGCTGCCCGT GCCTTTTCAA ATGCTGCTAG GTTCCATCAT AGCGTATTAT GCTCGCGCCA ACATCCCTCT AGCGACCGCG CTAGCCTGGA TTACCAACCC GCTTACCATG GGATTTATTT GGTATGGAGG TTATCGTTTT GGAACCTGGC TACTGAATAC GCCTGAACTG GCGACCATCG ATCCTCAAAT CCCGATCGCT TCGTTAGAAT GGTTTGATCA AGTTTTTCCA TACATATGGC AGCCGTTCTT TCTAGGCAAC TTAGTATTGG GAGGAATTAT CGGCAGTGTG CTTTACCTTG TCATTGCGCA TTTTCATTTT TATTTCTTCA AAAGACTGTT TAAATCTGCT GACTGA
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Protein sequence | MFRYIKLQIH KIGRKTKMSP FLNRYFPRFK DNVYWFGDRK SFARAGFIGA FCMMLPVPFQ MLLGSIIAYY ARANIPLATA LAWITNPLTM GFIWYGGYRF GTWLLNTPEL ATIDPQIPIA SLEWFDQVFP YIWQPFFLGN LVLGGIIGSV LYLVIAHFHF YFFKRLFKSA D
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