Gene Tcr_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0557 
Symbol 
ID3762377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp626951 
End bp627466 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content43% 
IMG OID637785270 
Producthypothetical protein 
Protein accessionYP_390827 
Protein GI78484902 
COG category[S] Function unknown 
COG ID[COG3216] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.235942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCCGTT ATATCAAACT CCAAATCCAT AAAATCGGTC GCAAAACAAA AATGTCTCCC 
TTTCTAAACA GGTATTTTCC TCGTTTTAAA GACAACGTTT ATTGGTTTGG CGATCGAAAA
TCATTCGCAA GAGCGGGCTT TATCGGCGCT TTCTGTATGA TGCTGCCCGT GCCTTTTCAA
ATGCTGCTAG GTTCCATCAT AGCGTATTAT GCTCGCGCCA ACATCCCTCT AGCGACCGCG
CTAGCCTGGA TTACCAACCC GCTTACCATG GGATTTATTT GGTATGGAGG TTATCGTTTT
GGAACCTGGC TACTGAATAC GCCTGAACTG GCGACCATCG ATCCTCAAAT CCCGATCGCT
TCGTTAGAAT GGTTTGATCA AGTTTTTCCA TACATATGGC AGCCGTTCTT TCTAGGCAAC
TTAGTATTGG GAGGAATTAT CGGCAGTGTG CTTTACCTTG TCATTGCGCA TTTTCATTTT
TATTTCTTCA AAAGACTGTT TAAATCTGCT GACTGA
 
Protein sequence
MFRYIKLQIH KIGRKTKMSP FLNRYFPRFK DNVYWFGDRK SFARAGFIGA FCMMLPVPFQ 
MLLGSIIAYY ARANIPLATA LAWITNPLTM GFIWYGGYRF GTWLLNTPEL ATIDPQIPIA
SLEWFDQVFP YIWQPFFLGN LVLGGIIGSV LYLVIAHFHF YFFKRLFKSA D