Gene Tcr_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0546 
Symbol 
ID3761593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp611925 
End bp612755 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content41% 
IMG OID637785258 
ProductIon transport protein 
Protein accessionYP_390816 
Protein GI78484891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTGGA ATGAATTCCA GTTCAAGTTT CAACATATTC GTGATAACAA GTTATTTGAA 
TTGTTTGTCA TCAGTGTCAT TATCCTTTCA TCTTTGATGA TCGGGCTTAA GACCTACGAT
TTGCCGTCGG GTTTCATGAC GTTTTTATGG GTGATGGATT ACGCGGTAAC GGTTTTCTTT
TTAATTGAAA TTCTGATTCG AATGGCCGCG GAAGATCGGT TGGTCGATTT CTTTAAAAAA
GGCTGGAACA TTTTTGATTT TACCATCGTA GTGGTGAGTT TGATTCCATT AGACGACTCG
CAATATGCGC TGATAGCCCG TATGCTGCGC TTATTCCGTG TGATGCGTTT GATTTCCTTT
ATTCCTGAGT TGCGGGTATT AGTGAGTGCA TTGATCAGCG CTTTGCCGCG CATGGGGTAT
GTCGCTCTAT TAATGTTTAT TATTTTTTAT CTGTATGCGG TGATTGGCAA TCTATTATTT
GCCCAAATCA ACCCGACGTT ATGGGGCGAT CTTGGCATTT CCTTGCTGAC ATTGTTCCGA
GTGGCTACTT TTGAAGACTG GACTGACGTG ATGTATGAAA CCATGACAGT CTATAGCTTG
AGCTGGATTT ACTACTTGAC GTTCATTTTC TTCTCTGCCT TTGTGTTTCT GAATATGATG
ATAGGAATTG TGGTTGAAGT GTTGGATGAA GAGCATAAGA AGATGATTGC GTTGGAAGAA
GAAGTGGTTG GCAGTGAAGT GATGGCGCAT CATGAAAAAT TGGAACGTGA AGTGGCTGAT
TTGCATCGAA AAATAGACCT GTTGATTCGG CAATCGTCAA CACGTTCGTA A
 
Protein sequence
MTWNEFQFKF QHIRDNKLFE LFVISVIILS SLMIGLKTYD LPSGFMTFLW VMDYAVTVFF 
LIEILIRMAA EDRLVDFFKK GWNIFDFTIV VVSLIPLDDS QYALIARMLR LFRVMRLISF
IPELRVLVSA LISALPRMGY VALLMFIIFY LYAVIGNLLF AQINPTLWGD LGISLLTLFR
VATFEDWTDV MYETMTVYSL SWIYYLTFIF FSAFVFLNMM IGIVVEVLDE EHKKMIALEE
EVVGSEVMAH HEKLEREVAD LHRKIDLLIR QSSTRS