Gene Tcr_0531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0531 
Symbol 
ID3761501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp594672 
End bp595265 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content47% 
IMG OID637785243 
Productrecombination protein RecR 
Protein accessionYP_390801 
Protein GI78484876 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0553702 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAGCC CTGTTATTAA CGAACTGATC GATGCTTTTA AGTTGTTGCC AACCATTGGG 
CCGAAATCGG CCCAACGCTT GGCTTATTTC TTATTGCAAA ATCATCAGCA GGATGGTCAT
CGCCTAGCGT CTGCAATAGA ATCTGCACTT GAAAAAGTGG GGTATTGCCA GCAGTGTCGC
AACTTGTCTG AAACGGAGAT ATGTGGCTTT TGTGCCTCAA AATCGAGACA AACCGATCAG
TTGTGTATTG TTGAAACGCC AACGGATGTG GTGGCGATTG AGCAATCAGG CATCTATAAA
GGTCAGTACT TTGTGTTGAT GGGGCATTTG TCACCTATAG ACGGCATTGG TCCAGATGAG
CTTGGGTTGC CTATCTTACG AGATAGATTG GCTCAGGGTG AGATACAGGA GTTGATTCTA
GCGACGAATC CTACGGTGGA AGGTGAGGCG ACGGCTCATT ATATCCAGCA GATGGCGATA
GAGTTTAATA TCTCTGTAAC GCGTTTGGCG CAAGGTATTC CGCTGGGTGG CGAGTTAGAA
TATATCGATA GCGGTACATT AGGTCAGGCG TTTGCTGGTC GTAAAGCGGT GTAG
 
Protein sequence
MQSPVINELI DAFKLLPTIG PKSAQRLAYF LLQNHQQDGH RLASAIESAL EKVGYCQQCR 
NLSETEICGF CASKSRQTDQ LCIVETPTDV VAIEQSGIYK GQYFVLMGHL SPIDGIGPDE
LGLPILRDRL AQGEIQELIL ATNPTVEGEA TAHYIQQMAI EFNISVTRLA QGIPLGGELE
YIDSGTLGQA FAGRKAV