Gene Tcr_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0481 
Symbol 
ID3762277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp538953 
End bp539969 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content47% 
IMG OID637785192 
ProductDNA polymerase III, delta subunit 
Protein accessionYP_390751 
Protein GI78484826 
COG category[L] Replication, recombination and repair 
COG ID[COG1466] DNA polymerase III, delta subunit 
TIGRFAM ID[TIGR01128] DNA polymerase III, delta subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATGG CGCCTGCTTT TTTAAAGCAG TTACAGAATC CTCATTTTGA GATCAAACCG 
ATCACGTTGA TTTATGGTGA GGAACCTTTG TATGTTCGTC GTGCTTTGGA TGGATTACGA
GGGTTGCTCA AGTCGCAAGA GTATTTTCAA CGTGACCGTT ACGAAGTGGA TGCGAGCTTT
AAGTGGGCCG ACCTGAAAAT GGAAACACAA GCCGGCACGT TGTTTGCAGA TCGCCGTATC
ATTGAGCTGG ATATACCAAA AGGCACACCG GGTAAAGAAG GTGGAGCGTT TATTCAAGAA
TGGGCGAATG CTATGCATGA TCAGCCGCCT GAAATATGCC TAGTGATTAC CTGTGAAAAA
CTGGATAGCC GCCAGTTGAA GTCGAAATGG GTTCAGGCGA TTGAAGCACA CGGCTGGGTA
GTGCAATCCA AACCGATTGA AGGGATTGGG TTGCTTAAGT GGTGCCAGAA CCGCGCCCAG
GAAGCCGGAC TTAGCTTGGA TGAAGAAGCC GCCGGTTTGT TATCGGAGCG AGTGGAAGGC
AATTTACTGG CGGCAGATCA GGAAATGGAA AAGCTGGCGT TGCTTTTCCC GGCTGGCAGT
GCGTTAACAG CACAGAATAT TATTGATAAT GTCGCAGATC AGGCGCATTA CCAGTTATTT
GCGTTAAGTA CGGCCATGCT CTTTGGTCGA ACTCAATACG CTTTACAAAT TTTACATCGA
TTGCAGCAGG AAGGTTTGGA AGCGCCGATT GTGCTTTGGT TGCTGTCGAA AGAGTTACGG
CAGTTAATTT CAATTGCGCA GAAGCAACAA ATGTTGTCGT TGCCGCAAGT GTATAAGCAG
TTACGCATTT GGTCTTCTAA ACAGGCCGAA TTCAGTGCGG CTTTGCAGCG TCATGACTTG
GCTTATTGGC AAAGTTTGTT GAATGTTGCA TTGCAAGTTG ATTTGACGAT TAAAGGCCTT
CGAAAAGGCG ACGAATGGTT AGGTCTTTCA GAACTGGTGT TTAAGATTTC GCAGTGA
 
Protein sequence
MIMAPAFLKQ LQNPHFEIKP ITLIYGEEPL YVRRALDGLR GLLKSQEYFQ RDRYEVDASF 
KWADLKMETQ AGTLFADRRI IELDIPKGTP GKEGGAFIQE WANAMHDQPP EICLVITCEK
LDSRQLKSKW VQAIEAHGWV VQSKPIEGIG LLKWCQNRAQ EAGLSLDEEA AGLLSERVEG
NLLAADQEME KLALLFPAGS ALTAQNIIDN VADQAHYQLF ALSTAMLFGR TQYALQILHR
LQQEGLEAPI VLWLLSKELR QLISIAQKQQ MLSLPQVYKQ LRIWSSKQAE FSAALQRHDL
AYWQSLLNVA LQVDLTIKGL RKGDEWLGLS ELVFKISQ