Gene Tcr_0442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0442 
Symbol 
ID3761469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp494862 
End bp495746 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content46% 
IMG OID637785153 
Productribosomal protein L11 methyltransferase 
Protein accessionYP_390712 
Protein GI78484787 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2264] Ribosomal protein L11 methylase 
TIGRFAM ID[TIGR00406] ribosomal protein L11 methyltransferase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTGGA TTCAAATCAA CACCACTGTT TCAGAAGCGC TTGCGGAACC ATTATCGGAT 
GCTTTTATGG AAGTGAACGC TGCGTCTGTA ACGTTTGCAG ACGCAAAAGA TCAACCTATT
TTCGAACCAG AAATTGGCAC AACGCCCATT TGGAGTCAAA CCAAGGTCAT TGGTTTATTT
GATGCTGAAG CCGACATTCC CGCCGTAATT AATCAATTAG CGACCTTAAT ACCGGACGTG
CCAGCTGAGC GCTATAACAT TGAAGCACTC GAAGATAAAG ATTGGATTCG TGCCTGGATG
GATCAGTTCC AACCTATGCA GTTTGGCTCG CGTTTATGGA TTGTGCCCAG CTGGTGTGAC
ACTCCTGACC CCAAAGCGGT TAACCTCATG CTGGATCCTG GCATGGCCTT TGGAACGGGC
ACTCACCCGA CAACGGCTTT ATGCCTTACT TGGCTTGACC AAAACCCTCC TACCGATTTA
ACGGTTATTG ATTATGGCTG TGGCTCAGGT GTATTGGCGC TTGCCGCTGA AAAGTTAGGC
GCAAAGCATG TAAAAGGAAC GGACATTGAT CCACAAGCGA TTATTGCCAG TCAGCAAAAT
GCCGACAGAA ATAACGCCAA CATTGAATTC AAACTGGTGA AAGAATTTCA ATCCGAACCC
GTTGACCTAT TAATAGCCAA CATTCTTGCA GGCCCGCTCA AAGCGCTTGC ACCAGAATTC
ATTCGTTTGA TGAAACCCAA TGCTACGCTG ATTTTATCGG GCCTATTAAC CAACCAGGCA
GCGGACTTGA TTGCCTTTTA TCAGCAACAA GGGTTTGAGT TTTTAGCTCA GAATGACTTG
GATGAATGGT CTCAGCTGAG CTTTACTAAA CAAGTGACCT CTTAA
 
Protein sequence
MAWIQINTTV SEALAEPLSD AFMEVNAASV TFADAKDQPI FEPEIGTTPI WSQTKVIGLF 
DAEADIPAVI NQLATLIPDV PAERYNIEAL EDKDWIRAWM DQFQPMQFGS RLWIVPSWCD
TPDPKAVNLM LDPGMAFGTG THPTTALCLT WLDQNPPTDL TVIDYGCGSG VLALAAEKLG
AKHVKGTDID PQAIIASQQN ADRNNANIEF KLVKEFQSEP VDLLIANILA GPLKALAPEF
IRLMKPNATL ILSGLLTNQA ADLIAFYQQQ GFEFLAQNDL DEWSQLSFTK QVTS