Gene Tcr_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0417 
Symbol 
ID3761198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp467429 
End bp467968 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content45% 
IMG OID637785128 
ProductFMN-binding 
Protein accessionYP_390687 
Protein GI78484762 
COG category[C] Energy production and conversion 
COG ID[COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000846474 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGA TTATCCCCAT ACTCGGACTT CCGATCCTCT GTTCAAGCCC AATAGCCTAT 
GCGGTGCAAT ATTTAAATGA AGATCAGGTT CAAGTGGCTT TATTTGGACA ACAGGCCTCG
TTCACCCCCA CTCTCATCAA ACTAAATGAA GAGCAACGAG ATCAAATCGA AACAATCAGT
GATGTCCGCC AACGTTGGAA AACCCAAAAA GCTTGGCAAG CCTTCACTCC TGAGAAAGAT
TTTCTCGGCT GGGTCATTAT CGATAAAGTC ATCGGAAAAC ACGAATTCAT AACCTATGCG
ACAGCCATTT CACCCGAAGG AAAGATTCTA GGCATTGAAA TTATGGACTA CCGTGAAACT
TATGGCGGTG AAGTGCGTCA TACTGAGTGG CGAACGCATT TTGTCGGAAC GAATAAAAAC
AGCCCTTTAG AGTTGGCGGA AGACATCCCT AATATCAGCG GTGCGACACT GTCTTGTCGG
AATGTCACAA ATGGCGTTAA ACGATTACTT GCACTGTATG AGGTGGTACT CAAGCCATGA
 
Protein sequence
MKQIIPILGL PILCSSPIAY AVQYLNEDQV QVALFGQQAS FTPTLIKLNE EQRDQIETIS 
DVRQRWKTQK AWQAFTPEKD FLGWVIIDKV IGKHEFITYA TAISPEGKIL GIEIMDYRET
YGGEVRHTEW RTHFVGTNKN SPLELAEDIP NISGATLSCR NVTNGVKRLL ALYEVVLKP