| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0381 |
|---|
| Symbol | |
|---|
| ID | 3762328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 431439 |
|---|
| End bp | 432008 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637785090 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_390651 |
|---|
| Protein GI | 78484726 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGATT TCTTTACAAA CTTATCTTTT TCATTGTCAC CATTGATTGC CAGTGGCTTG
ATTCTGTTAA TGTATTTTCT ACTGAATGGG GTTTTGAGAA AAGTGATTAC TTCCATCGGT
GAGTTTAAAA AAGTACCGGT GGGGCGACAC ACTCAAGTTT ATAAGTATTT TCGATTTATT
TTAATCGTAT TCACAGCGGT GGCTTTATTG GTTGCCTGGG GCATTGATTA TAAAGGGCTG
GCTGTTTTAG CAACGTCCAT CTTGGCCATG TTGGCCGTGG CCTTGGTGGC GCAATGGTCT
ATCTTGAGTA ATGTGACGGC CGGTGTTCTG ATCTTCTTTG CTTTTCCGGT TCGAATCGGC
GATAAAATGG AAATTATCGA TGGCACGTCT TCTGTCACGG GAGAAATTAT TGAAATCAAC
TTGTTTCAAA TTATTTTAGA AGATGATGAT CGACAATTGA TTTCTTATCC GAACAATCTT
TTGTTGCAAA AAGCGGTCAG AAAAATCCAA CCCAAGTCCT CGATAACGAA AACAGCGGCC
GTTAAACGCA TGCGGGATCG TTTAAAATAA
|
|---|
| Protein sequence | MTDFFTNLSF SLSPLIASGL ILLMYFLLNG VLRKVITSIG EFKKVPVGRH TQVYKYFRFI
LIVFTAVALL VAWGIDYKGL AVLATSILAM LAVALVAQWS ILSNVTAGVL IFFAFPVRIG
DKMEIIDGTS SVTGEIIEIN LFQIILEDDD RQLISYPNNL LLQKAVRKIQ PKSSITKTAA
VKRMRDRLK
|
|---|
| |