Gene Tcr_0373 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0373 
Symbol 
ID3762320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp421527 
End bp422972 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content37% 
IMG OID637785082 
Producthypothetical protein 
Protein accessionYP_390643 
Protein GI78484718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCAA CCTCGGATAA ACAGAAGCAG CGCTTTGTTA CTGAGTTGCT AAAAGATCTT 
TCTGAAGACA ATTTAGCTAT TTTTGCTGGT GCTGGTTTGT CTGCTCCCGC AGGTTTTGTA
AGCTGGCCTG AATTGTTAAG ACCTATTGCA GACGAGTTGG AGCTTGAAAT AGAGAAAGAA
ACTGATCTAG TTGCATTGGC TCAATATCAC TGTAATGCTA ACCAGGCTAA TCGTGGGCGA
TTGAATCAAA TTTTGGTAGA TGATCTTTCT CATGATGCGA AAATTACTGA TAACCACAAA
GTTATAGCTA GACTTCCTAT TTCAACTTTC TGGACAACAA ACTATGACAA GTTGATTGAA
AGATCTCTTG TTGAGGTTGG AAAAGTTCCA GATGTTAAGC ATCGAGTAAA ACAGTTAAGT
TTTACTAAAC GTGGACGAGA TGCGGTTGTA TATAAGATGC ATGGTGATAT TGAACACCCT
GATGAAGCTG TACTAACAAA AGATGACTAT GAATCCTATC ACGTCAAAAT GCAGCCATTT
ATTAATGCCC TTAGTGGAGA CCTTGTATCA AAGACATTCC TATTTATGGG ATTTAGCTTC
ACCGACCCAA ATTTAGATTA CATTTTAAGC AGGGTGAGAG TCGCCTATAC AAAAGATCAA
AGGCAACATT ATTGTATTCA GAAGTTAGTT TCAGCGTTAC CAGGAGAGTC GGCTGCTGAT
ACAGAATATC GTCAACGCAA ACAAGAACTT TTCATCCAAG ATTTATTGCG TTTTGGAATT
AAAACAATCC TTGTGTCTGA TTATTCAGAA ATTACGGATT TACTACTTTC CCTTGAGTCT
TCATACCGAC GTAAGTCAAT TTTTATTTCT GGAGCAGCTC ATTTATACGG TAGATGGGAC
AAGGAAGAAG CCGAGAAATT TATATACAAA CTAGCAAAAG AATTATCAGC TAAGGATTTT
AGAGTTGTAT CAGGCTTTGG TTTAGGTGTT GGAAGTTCTG TAATTTCGGG TGTTCTTGAA
AATGTCTATA TGAATGGCAG TAAGTTGGAC TCTGAACAGT TGATCTTAAG ACCTTTTCCT
CAAAATCAAG TTGGGCAACG ACCTAGAGAT GAGTTGTGGC ATGATTATAG AAATGACATG
ATTTCTTATG CAGGAATAGC GATATTTCTT TTTGGAAATA AGTTGGTTAA AGATGAAGTT
ATTGAGTCAG ATGGCTTAAT CAAAGAGTTT GAAATTGCAC GAGAGAAAGG TCTTGTATTA
CTTCCTATTG GCGCTACAGG TTTTGCAAGC GAGTTTTTAT ACAAACGACT TATTGACGAA
GGGTATTTTC ACAGTGATGT TATTCCGGAT GGAATGGATT CTGAAATTCA GGTCATCGGT
AATGAAAGTT CAGATTTAGA AGCGATTACA AATTCGTTAC TTAAAATAAT TGATGCTTTA
AAGTAA
 
Protein sequence
MEPTSDKQKQ RFVTELLKDL SEDNLAIFAG AGLSAPAGFV SWPELLRPIA DELELEIEKE 
TDLVALAQYH CNANQANRGR LNQILVDDLS HDAKITDNHK VIARLPISTF WTTNYDKLIE
RSLVEVGKVP DVKHRVKQLS FTKRGRDAVV YKMHGDIEHP DEAVLTKDDY ESYHVKMQPF
INALSGDLVS KTFLFMGFSF TDPNLDYILS RVRVAYTKDQ RQHYCIQKLV SALPGESAAD
TEYRQRKQEL FIQDLLRFGI KTILVSDYSE ITDLLLSLES SYRRKSIFIS GAAHLYGRWD
KEEAEKFIYK LAKELSAKDF RVVSGFGLGV GSSVISGVLE NVYMNGSKLD SEQLILRPFP
QNQVGQRPRD ELWHDYRNDM ISYAGIAIFL FGNKLVKDEV IESDGLIKEF EIAREKGLVL
LPIGATGFAS EFLYKRLIDE GYFHSDVIPD GMDSEIQVIG NESSDLEAIT NSLLKIIDAL
K