Gene Tcr_0361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0361 
Symbol 
ID3762347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp409051 
End bp410856 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content44% 
IMG OID637785070 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_390631 
Protein GI78484706 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC CAACGCTTTG GAGCCGAACC AAAATCTCGA CCTTAAGTAA TTTATTACTC 
ATTATGATGG CGGGTGCGGG CATTTTTTTT ACCTCTGCTT TTAGCTTACT TCACCATGAA
ATCTTTTTGG TTCAACAAGA CTGGCAAACG TTACACCCCT TGTTATTAAA CAGTTCAGCA
CAATCAACCT CTTCTGAAGT CGTTCGGCTT TCACACCACC TGACAGAAGG TTTAGCTTGG
ATGAGCCAAC TCACGCTTAT TTTTATTATT GCGGTTCTGA TTGCGGTGGG TGCTTTTTTT
ATTTTGATGT ACAACACCCT GATGAATAAA ATTGTACGGC CGCTGAGAAC CTTGGAAAAA
GGGATTTTAG AAATTACCTC GTCCAATGAT TTTTCAAAAA CCATTTCAAT CAAATACCAG
GATGAAGTTG GGCAGGTCTC ACAAAGTTTT AATCAACTGT CGCATAACCT AAAAAGTATT
TTTGACCAAA TTAATGATCG GCTGGCTGAA GTGGCTGATG GTAAATTTAA TATTCGGTGT
GATGTTGAAG TATATGGAGA TTTAGAGGTT CTTAAAAACA ATGTCAATGC ATCGATTGGC
AGCATTGAAC TGACAATGAA CTCTTTAGAA TCGATCTCAC AAGCCATTGC ACAAGGAGAT
TTTTCTATTC GAATGGATCA AAATGTCAAA GGCAGCCTGA GAAAAAATGT CGATTTTGCA
ATGCAACAGA TGGATCAAAT CATCGACCAA ATCAACCAGG TGATGCGCAA GGTCAACCAC
GCCGACTACA GCCAACGCGT GAACATCGAA ACACAAGGAC GATTAACGGA ACTGAAAACA
TTCATTAACC AAACCGTGGA TACCGTTTCA ATCAGCATTC AGGCACTTAA CCAAGCGGTA
GACTCTCTTC ACCAAGGCAA TCTAACGCAT CAAATTGAAA CCTCGTTTAA AGGTGAACTT
AACCTGCTTA AAGAAAACCT AAACGGCACC ACTTCGTATC TGAATGATAC CATCATTCAG
GTGATGGACG GCTCAACAGA CGTCAACGCT GGCATTGAAC AGATTGCGCA AGGCAATCAA
GACCTGTCTC ACCGAACACA AGGGCAAGCC GCCTCTTTAG AAGAAATTGC AGCTGCAGTG
GAACAAATGA CATCGGCCAT CACACAAACG GCCGACAATG GACAAAAAGC ACAGACGTTC
AGTGCAGACA CACTCGCATT AACGGATAAA GCCCATCATG TCATGGGTGA ATCGATCGAC
TCAATGGCTA AGATTAAAGC CGCCAGCGAA CGCATCAGTA CGTTCATTGA ATTGATAGAC
AGCATTGCTT TCCAAACCAA TCTTCTGGCT CTAAATGCCG CGGTTGAAGC GGCCAGAGCA
GGTGAGCAAG GAAGAGGCTT TGCTGTTGTA GCAGGCGAAG TTCGAAGCCT TGCTTCCAAG
TCCTCAGGTG CTTCAACTGA AATTCGAACG TTGATTGAAC AAGTCGTTAC CCAGGTGCAG
CAAGGGTCAA GTAAACTCGA TGAAACCAAT TCCGAATTTG AACGCGTAAC GCAAGGCATT
CAGTCGGTTA ATGATTTAAT CACCGAGATT TCGCACAGCG CGCAGGAACA AGCGAAAGGC
CTGTCCCAAA TCAACCAAGC GATTTCCGAA CTTGATCAGG GCGTTCAACA AAACGCCGCA
TTGGTTGAAC AAACTTCAGA CAGTGCTCAA AATTTAACGG AATTGTCCCA GTCTCTCATG
AGGTCGGTTT CACAATTCAA AACCAGTGCA CACGCTGCCT TGCCAAAGAA ACTTATCGGT
CAATGA
 
Protein sequence
MKKPTLWSRT KISTLSNLLL IMMAGAGIFF TSAFSLLHHE IFLVQQDWQT LHPLLLNSSA 
QSTSSEVVRL SHHLTEGLAW MSQLTLIFII AVLIAVGAFF ILMYNTLMNK IVRPLRTLEK
GILEITSSND FSKTISIKYQ DEVGQVSQSF NQLSHNLKSI FDQINDRLAE VADGKFNIRC
DVEVYGDLEV LKNNVNASIG SIELTMNSLE SISQAIAQGD FSIRMDQNVK GSLRKNVDFA
MQQMDQIIDQ INQVMRKVNH ADYSQRVNIE TQGRLTELKT FINQTVDTVS ISIQALNQAV
DSLHQGNLTH QIETSFKGEL NLLKENLNGT TSYLNDTIIQ VMDGSTDVNA GIEQIAQGNQ
DLSHRTQGQA ASLEEIAAAV EQMTSAITQT ADNGQKAQTF SADTLALTDK AHHVMGESID
SMAKIKAASE RISTFIELID SIAFQTNLLA LNAAVEAARA GEQGRGFAVV AGEVRSLASK
SSGASTEIRT LIEQVVTQVQ QGSSKLDETN SEFERVTQGI QSVNDLITEI SHSAQEQAKG
LSQINQAISE LDQGVQQNAA LVEQTSDSAQ NLTELSQSLM RSVSQFKTSA HAALPKKLIG
Q