| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0335 |
|---|
| Symbol | |
|---|
| ID | 3762360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | + |
|---|
| Start bp | 380096 |
|---|
| End bp | 381166 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637785044 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_390605 |
|---|
| Protein GI | 78484680 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAGAC ATATAGAGAA AGGTGAGCTA GCTTTATACA AGTACAATAA AATTAGATAT
TCTTTTGTTG AACTAGATGC TGGTGAGCAA CAAGTCCTGA CCAGTGATCC TTGGTCTTTT
CTAAGTTCAA ATCTTCAAGT GCGCCTCAAC AAATCACGCG GTAACAATAA AACGAAAATT
GAGCGCGCTA TATATTATTC CGGGTTAGCA GAAGATTTTT ATAGGGCGGC AGAAGTTAGC
CCGCTTCCAG CTAAGGGCGC TCTTTTGTAT TACGGTATGC TTGACTTGGT CAAATGTTAT
TTGAGCTTGA ATGATGTTCC TTTGGAATCA AGTCATGAGC ATCATGGTTT AGTGCTGCCA
ATTGGAAAAG AGCAGACAAT CGAAGTCAAA ACCAAGATGA AAGGTGCTGT AAATATCTTC
TATGAATTCA CTCGCTTGCT TGGAAAGCCC ATTTCAGCAA GCCATGAAGT AAGATTTGAA
AAAGCTCTTT CTCATGTGCC AGAAGTGCAT AGCATTTACA CAAGTCTTGG GCATTTATCA
AAACGAAAGC TCTTGCCTGT CGAAATCGAG TTTCAGGTGA ATGAGGCGAG AGACAAAATA
TTCACTGAAA TCGTTTATCA AAAAGAGCAA GAAGTCAAAG TTGAGGTTGA TAAATTCCTC
AAAGGAAATC GAAAAAAGTA CCTAAAAGAA GGGTTTCCAA GGGATAACAA AGTCGTATAT
AGAGCAGCAA GACGAAAATC ATACACACAA GACAATATTC ATCGTATTTA CAAGAATATT
TTGGCTGAAT ACAAGAAGCT TGATATTGTT CCTATTCTGA CAAAACAAGG CTATCGGTAT
TATGTGGATT TGAGACCCGG TGATTTGCCT CAATTGTCGT ATAGTTTATT AGCAATGTTC
TATCTAGGAA GTGCAGCAAG GTATAGACCT CTGGAAGTGA AGTCATTATT GGAAGGTGAA
TTGCGTCCTC TCGTTAGTGA GTTTGTTAGC CTGGCGCCGA AGCAATTCCT TTATCAAATG
GTATCTTTGA CAACAAACAA AGAATGTGTC ATTCCATTTG CAGCTATATA G
|
|---|
| Protein sequence | MARHIEKGEL ALYKYNKIRY SFVELDAGEQ QVLTSDPWSF LSSNLQVRLN KSRGNNKTKI
ERAIYYSGLA EDFYRAAEVS PLPAKGALLY YGMLDLVKCY LSLNDVPLES SHEHHGLVLP
IGKEQTIEVK TKMKGAVNIF YEFTRLLGKP ISASHEVRFE KALSHVPEVH SIYTSLGHLS
KRKLLPVEIE FQVNEARDKI FTEIVYQKEQ EVKVEVDKFL KGNRKKYLKE GFPRDNKVVY
RAARRKSYTQ DNIHRIYKNI LAEYKKLDIV PILTKQGYRY YVDLRPGDLP QLSYSLLAMF
YLGSAARYRP LEVKSLLEGE LRPLVSEFVS LAPKQFLYQM VSLTTNKECV IPFAAI
|
|---|
| |