| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0262 |
|---|
| Symbol | |
|---|
| ID | 3761432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiomicrospira crunogena XCL-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007520 |
|---|
| Strand | - |
|---|
| Start bp | 310916 |
|---|
| End bp | 311803 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637784967 |
|---|
| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| Protein accession | YP_390532 |
|---|
| Protein GI | 78484607 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
|---|
| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCAC TTTTCGAATC AAATTTAACC AGCTTGCCTT TGATTAACAA AGGGAAAGTA
CGCGACTTGT ATGACATTGA TGAAAACCAC TTGCTCATTG TCACCACAGA TCGAATTTCC
GCATTTGATG TGGTGCTGCC AACGCCTATT CCAGGAAAAG GGCGTATTCT GACTGAAACC
GCACAGTTCT GGATGAAGAA AGCCAGTCAC ATCCTGCCGA ATCAACTAGC GGATGATATG
CAACTGTCTG ATGTACTGAC GCCAGATGAA CTTCTTCAAC TGGATGGTCG AGGCATGATT
GTACGCAAAC TGACGCCTCT GCCAGTCGAG GCCATTGTGC GCGGCTACCT AGTAGGCTCG
GGTTGGAAAG AATACAAAAA AACACAAACG GTCTGTGGCA TTGAACTGCC TAAAGGACTC
AAGAAAGCAC AACAATTACC TGAACCCCTT TTTACACCAT CAACGAAAGC CGAGATAGGA
GATCATGATG AAAACATCTC TTTTGAAGAA GTGGTTAAGT TAATTGGTGA AAAGAAAGCA
CAAAAGGTTA AAGAATACAG CTTGGCGCTC TACAAAATGG CCGCTGAGTT TGCGGCTGAA
CGCGGCATTA TTATCGCGGA TACCAAGTTT GAATTCGGCG AGGATGAACA CGGTGTCATC
CACTTAATCG ATGAAGCCCT GACACCAGAC AGCTCTCGCT TCTGGCCGGC AAAAACCTAC
CAAGTCGGTA AAAACCCAGA CAGTTTCGAC AAACAATACA TTCGTGATTA TTTAGAATCG
CTGGACTGGG ACAAAACCGC TCCCGGCCCG GAATTACCGG AAGAAGTCGT TGATATGACT
TTCCAGAAGT ATCAGGAAGC GCAAGCGCGC TTAATGGAAA ACCCATAA
|
|---|
| Protein sequence | MQPLFESNLT SLPLINKGKV RDLYDIDENH LLIVTTDRIS AFDVVLPTPI PGKGRILTET
AQFWMKKASH ILPNQLADDM QLSDVLTPDE LLQLDGRGMI VRKLTPLPVE AIVRGYLVGS
GWKEYKKTQT VCGIELPKGL KKAQQLPEPL FTPSTKAEIG DHDENISFEE VVKLIGEKKA
QKVKEYSLAL YKMAAEFAAE RGIIIADTKF EFGEDEHGVI HLIDEALTPD SSRFWPAKTY
QVGKNPDSFD KQYIRDYLES LDWDKTAPGP ELPEEVVDMT FQKYQEAQAR LMENP
|
|---|
| |