| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0204 |
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| Symbol | |
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| ID | 3761643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | - |
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| Start bp | 240816 |
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| End bp | 242141 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637784909 |
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| Product | Type I secretion outer membrane protein, TolC |
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| Protein accession | YP_390474 |
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| Protein GI | 78484549 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCACCGA CTCAAAAACC ATTACAACTG ACCGTAATAG CCTGTACGGC TTTACTTACT
TTTTCATTTA ATGCTTACGC CATTAATTTA AAAGAAGCCG TTGAAGACGC TGTTCTCCAT
AACCCTGAAT TTCGACAAGA AGTGAAAGCG TACCAAGCCA TAGAAGCTGA AGTGAAAGGA
GCCAAAGGCG GATATTATCC CAGTCTCGAC TTAAATGCCG GGATGGGATA TGAAGAAGTC
GATCGCCCAG GCATTGACAA CATTGGCAAT GGCTTAACGC GCAGAGAAAC GTCCGTTAAA
TTAACTCAAA ATCTGTTCGA AGGATTTGGC ACGCAAGATG AAATCAAACG CTTGCAATAT
CGTCTTGATG CACAAGCCTA CAAAACGCTT TCCAAAGCAA ATGATGTCGC CTTACAAATG
ATTCAAGCTT ATATTAATTT ATTAAAAGAA AAAAAATTAT TGAATTTGGC GCAAACGAAT
TTAGAAACCC ACTTAAAACT GCTGGACCAA ATCGAACGCC GTACCGAAGC GGGCATCGGG
AATCAGGTTG AAGTTGACCA AGCTAAAGCA CGTTTGGCTT TAGCTCGATC AAACTATGGC
GCGGTTGAAA ATAGGTTCTT TGATGCCCGA GCCAAGTTTC AACGTATCTT GGGACGAATG
CCAGAAGACA ACCTAATTGA GCCGAAAGCG GAATTTCCAT TGCCTAAAAC ACAGGAAGAG
GCCATCAATG TTGCCCTAAT GGACCACCCG ACCTTAAAAT CAGCCAGTGC GGACATCGCT
GCGGCCAAAA TGCAATATGA CTTATCAGGT TCCAACTACT ATCCACGCGT TGATTTGGAA
GTTGAAAAGA CGTTTGACAA TAACTTATCC GGCATTGAAG GCAACAACGA ATACCTTCAA
GCCATGGTGC GTTTTAAATA CAACCTCTAC AATGGGGGGC GAGACAGTGC CAACCGAGAA
AGAACAGCGA GCAATTTTCA ACAAGCGACC GAAGTTCGGA ACAACACGCA CCGACAAGTG
ATTGAAAATT TAAAATACGC TTGGAACGCC AAGGTCTACA TCAACAACCA ACTTGATTAC
ATGCGTCAGC ATATTAAACT TACACGAGAT ACGCTGAATG GATATCGTAA ACAGTTCAGT
CTCGGGCGTC GCTCTTTATT AGACTTACTG AATACCGAAA ATGAATACAT TAATGGGCTC
AATACCTTGG TGAGCAGTGA AGCAGATCAA CTAACGGCCA AATACCGCAT TTTAAATGCT
ACCGGGCACT TATTAAGCAC CATGGGAGTT AATTATGACT TCATCCAACC CTCTGAGACG
CCATAA
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| Protein sequence | MSPTQKPLQL TVIACTALLT FSFNAYAINL KEAVEDAVLH NPEFRQEVKA YQAIEAEVKG
AKGGYYPSLD LNAGMGYEEV DRPGIDNIGN GLTRRETSVK LTQNLFEGFG TQDEIKRLQY
RLDAQAYKTL SKANDVALQM IQAYINLLKE KKLLNLAQTN LETHLKLLDQ IERRTEAGIG
NQVEVDQAKA RLALARSNYG AVENRFFDAR AKFQRILGRM PEDNLIEPKA EFPLPKTQEE
AINVALMDHP TLKSASADIA AAKMQYDLSG SNYYPRVDLE VEKTFDNNLS GIEGNNEYLQ
AMVRFKYNLY NGGRDSANRE RTASNFQQAT EVRNNTHRQV IENLKYAWNA KVYINNQLDY
MRQHIKLTRD TLNGYRKQFS LGRRSLLDLL NTENEYINGL NTLVSSEADQ LTAKYRILNA
TGHLLSTMGV NYDFIQPSET P
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