Gene Tcr_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0179 
Symbol 
ID3762490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp212243 
End bp213223 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content51% 
IMG OID637784884 
Producttransport system permease protein 
Protein accessionYP_390449 
Protein GI78484524 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTGTAA TCGGGCTTTA TGCATTGAGT ATTGGGCCAA TTGAAATCTC ATTCAGGGCG 
ATTTTGAAGA GCTTTATTGG GGTGCCTGAA TCGGTGCAAA GTGACTTGGT GGTTTCTGAA
ATACGGCTCC CCCGAATTCT ATTGGGCCTA CTGGTTGGTG CCGGTTTAGG CGTGGCCGGA
GCGGCCATGC AAGGGTTGTT TCGGAATCCA TTGGCCGATC CCGCATTGGT TGGCGTTTCC
AGCGGAGCCG CATTAGCGGC AGTGACGGTG ATTGTCTTGG GTCATTCATT TCTAGCGGAA
TGGGTCGGGG TTTTTCAAAG TGCGGCGGTT CCCGTGGCGG CCTTTTTGGG TGGCCTTTTA
GTCACTTGGA TTATTTATCG AGTCGCGACG AAAAACGATC ACACCGATGT TGGATTAATG
TTGTTGACGG GCGTAGCGGT GAATGCGATT GCCGCCTCGG CAACGGGTTT TCTCACTTAT
TTGGCGACAG ACGAAGCGCT TCGAAACTTA ACTTTTTGGA CGATGGGCTC AATATCCGGC
GCGACTTGGT CGGATTTAAC GATGGTGCTT CTGCCAATAT TGGTGGCTTT AATCGGCCTA
CCTTTTTTTG CTCGTGGGTT GAATGCTTTT TCTATGGGCG AAGCGGTTTC AAACCATATG
GGGTTCCAGG TCAATCGATT GAAATGGGGA GTGATTAGCT TGAGCGCTTT AGCAGTTGGT
GCGGCGGTGT CGGTCAGTGG CATTATTGGG TTTGTGGGAT TGGTCGCGCC GCATTTAGTG
CGTTTACTAT TGGGGCCAGA CCATCGTTGG TTATTCCCTG GAAGTGCCTT GATGGGGGCG
ATGCTGGTTG TGGTGTCTGA TTTGTTAGCG CGGACCTTGC TTTCTCCTGC AGAAATTCCA
ATCGGTATTG TGATGTCCGC TATTGGTGGG CCTTTCTTCT TGTGGTTGTT GTTACAACGT
CGTTCACGAG TCGGTCTTTA A
 
Protein sequence
MLVIGLYALS IGPIEISFRA ILKSFIGVPE SVQSDLVVSE IRLPRILLGL LVGAGLGVAG 
AAMQGLFRNP LADPALVGVS SGAALAAVTV IVLGHSFLAE WVGVFQSAAV PVAAFLGGLL
VTWIIYRVAT KNDHTDVGLM LLTGVAVNAI AASATGFLTY LATDEALRNL TFWTMGSISG
ATWSDLTMVL LPILVALIGL PFFARGLNAF SMGEAVSNHM GFQVNRLKWG VISLSALAVG
AAVSVSGIIG FVGLVAPHLV RLLLGPDHRW LFPGSALMGA MLVVVSDLLA RTLLSPAEIP
IGIVMSAIGG PFFLWLLLQR RSRVGL