Gene Tcr_0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0176 
Symbol 
ID3762487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp209863 
End bp210825 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content44% 
IMG OID637784881 
Producthypothetical protein 
Protein accessionYP_390446 
Protein GI78484521 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTTTTC CTTCAACGGT TATTTACTTT ATGCTCGGGC TTTGTATCCC AGGCTTGAGT 
TCAGCGTCAC CCACTGATAT TACAGACGCC TCCATTAAAG GAAAGCTTTC CATCGATGCC
GACAATATTA GTGGCATGGT GCTGACAGAA CATTTCATGG CGCTTGCAAC CGATGAAGGA
ACCGCCATTC AAATATTACC GCGCCAAGGA AATCAATTTA TGGCGCTGCC AGAAAATCGA
GTCGTTCTAA CAAGCGCAAA TAAAGAGCTG GACATTGAAG CACTAGCCTG GCAACCGCCT
TATCTCTATG CCGTGGGTTC ACACGCTAAA AAACGAAAAA AAATAAAGTC AGAAGTTTCT
AATAAACAAA ACATCAAGCG TCTTACCCGC ATTTATGATG AACCTGCACG CAACCAGTTG
TTTCAAATCC GACTGGATAA AAAGCTGAAT GTCCGTCAAA TAAAAACGCT CTCACTAATG
CCCATTATAC AAAACACGCC TATTCTAACC CCCTTTACGG CCCTGCCGGG TAAAGAGAAT
GGTATCGACA TTGAAGGCAT GGCGGTCAGC GGAAACCATT TATATATTGG CTTTAGAGGG
CCGGTTTTAA GAGGCAACCT GGTTCCGATA TTGAAACTGA CACTTAAGGA CAAAAAATTC
GCTGTGCAGA CGCCTAAATT AAAACTGGTT AATTTAGGGG GGTTAGGTAT TCGAGACATG
GTCGCCGTCA AGGACAAAAT CTACTTATTA TCAGGTCCCA TCCATAACAT ACCCAATATT
TATCATATTC ACGCATGGAA CGGTAAAACG CAACTCACGC CCCTTCCACA CCTAAAAACA
TTGACTCAAC CGGCCGGAAA ACCAGAAGCC CTTTTTGTCA CGCGTCACCA CAAATCGTCA
AAACTACGCT TTTGGATTGG GCAGGACGGT CTTAAAAATG GTGGCATTGA ATCTTTTGAT
TAA
 
Protein sequence
MTFPSTVIYF MLGLCIPGLS SASPTDITDA SIKGKLSIDA DNISGMVLTE HFMALATDEG 
TAIQILPRQG NQFMALPENR VVLTSANKEL DIEALAWQPP YLYAVGSHAK KRKKIKSEVS
NKQNIKRLTR IYDEPARNQL FQIRLDKKLN VRQIKTLSLM PIIQNTPILT PFTALPGKEN
GIDIEGMAVS GNHLYIGFRG PVLRGNLVPI LKLTLKDKKF AVQTPKLKLV NLGGLGIRDM
VAVKDKIYLL SGPIHNIPNI YHIHAWNGKT QLTPLPHLKT LTQPAGKPEA LFVTRHHKSS
KLRFWIGQDG LKNGGIESFD