| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_0117 |
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| Symbol | |
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| ID | 3762525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 148621 |
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| End bp | 149769 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637784822 |
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| Product | putative oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_390387 |
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| Protein GI | 78484462 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAATTTTA CTCAACCCGT TCCGTTGTCC TTGTATGTAC ATTACCCTTG GTGTATTCAA
AAATGTCCTT ATTGTGACTT TAATTCACAC ACTCTTGGGG AAGACCAAGA ACAACGGTAT
ATTCAAGCAT TGATTCGTCA ATTGGAACAA ACCTTACCGG ATATTTGGGG GCGACCGATT
CAGTCCATCT TTTTTGGTGG TGGCACTCCC AGTTTGATGT CTGAAGCGGG GCTGGACATG
TTTTTATCTC AAGCCAGAGC ATTATTAGGG TTTCAACCCG ATATTGAAAT TACTTTGGAA
GCCAATCCGG GCACCGTTGA TTTTGAAAAG TTTTCAGGAT TTCGTCAAGC AGGGATTAAT
CGCTTATCCA TGGGAATTCA AAGTTTTGAT GATGAAAAGC TAAGAGATTT AGGGCGCATT
CACTCTTCTG ATGAGGCGTA TAAAGCTGTG GAAGCCGCCA GATCAGCTGG GTTTGATAAT
TTTAATTTAG ACTTGATGTT TGCCTTACCG AGTCAAACGT TAAAACAAGC CATACACGAT
GTTGAAACGG CTTTGGCGTT AGAGCCGACG CACATATCGC ATTATCAACT GACACTGGAG
CCGAATACTC CTTTTTATAA AAACCCGCCG GTGCTGCCGG AAGAAGATTT AGCTTGGGAA
ATGCAATTGG CTTGTCAGAC CGTTCTGTCG GAGACAGGGT ATCATCATTA TGAAGTGTCT
GCTTATGCTA AAAAGAACCA GGCCTGCCGC CATAATTTGA ACTATTGGCA GTTTGGCGAT
TATATTGGAT TGGGTGCAGG CGCACATGGC AAGATCACCC AGCCGCCACT TGGTGAAATT
TGGCGAACGC AAATGCCGGC GTCGCCAGGC GGCTATATGA ATATGATTGA AAGCGGAGAC
ATGGGGCGTC GCCATATTTT ATCGGATGAC GACGCCCTTT TTGAATTCAT GCTGAATGCG
CTACGCTTGC AGGATGGATT TCCTCTGGCC TTGTTCACTG TGCGAACCGG CTTGCCTTTA
CAAGTGATTG ACCCCCAGTT AAAAAGCATG ATTTCTAAAG GCTGGGCCGA GCAAGATCAA
GACAATTTAC AGTTAACGCA AACAGGTAAA ACGTATTTGA ATGAAGTATT GCAGCTTTTT
CTACCATAA
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| Protein sequence | MNFTQPVPLS LYVHYPWCIQ KCPYCDFNSH TLGEDQEQRY IQALIRQLEQ TLPDIWGRPI
QSIFFGGGTP SLMSEAGLDM FLSQARALLG FQPDIEITLE ANPGTVDFEK FSGFRQAGIN
RLSMGIQSFD DEKLRDLGRI HSSDEAYKAV EAARSAGFDN FNLDLMFALP SQTLKQAIHD
VETALALEPT HISHYQLTLE PNTPFYKNPP VLPEEDLAWE MQLACQTVLS ETGYHHYEVS
AYAKKNQACR HNLNYWQFGD YIGLGAGAHG KITQPPLGEI WRTQMPASPG GYMNMIESGD
MGRRHILSDD DALFEFMLNA LRLQDGFPLA LFTVRTGLPL QVIDPQLKSM ISKGWAEQDQ
DNLQLTQTGK TYLNEVLQLF LP
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