Gene Tcr_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0108 
Symbol 
ID3762516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp138196 
End bp138744 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content43% 
IMG OID637784813 
Productadenine phosphoribosyltransferase 
Protein accessionYP_390378 
Protein GI78484453 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID[TIGR01090] adenine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTTGCC ACAAATATAA GAAATTAATT ATGAAGCAAC ATCCATTAGC GCAATACCTA 
GAGGCCGTTC CAGATTTTCC AAAAGAAGGC ATTCTGTTTC AAGATATTTC ACCGTTACTG
CGAGACCATT TTGTAGCAAC GATTGATGCC ATGTCATTGC TTTTCAGTGC CAAGGAATGG
GCTGAAGTCG ATTATCTGGT GGGCGTGGAA TCGCGAGGCT TTATTTTTGC CTCTGCTTTA
GCTTTAAAGC ACGACAAAGG CTTTGTGAAA GTTCGTAAAC CGGGCAAATT GCCCAATGTG
CATGCCTCGA TGGAGTATGG CCTGGAATAT GGTACAGACA AGCTTGAAAT GCAAAAAGGG
AATGGTAAAA AAGTCATTAT TTGTGATGAT TTAATTGCCA CAGGAGGGTC CATGCAAGCC
GCCGCAAAAC TCTGCAATGA AGTAGGGTAT GAGGTTGTGG GAATGGCTTG TCTTGTAGAT
TTGAAAGCGC TTAATAGCTT TAGTCACGAC GGAATGACCG TTCGATCCGT CATTCAATTT
GATGACTAA
 
Protein sequence
MLCHKYKKLI MKQHPLAQYL EAVPDFPKEG ILFQDISPLL RDHFVATIDA MSLLFSAKEW 
AEVDYLVGVE SRGFIFASAL ALKHDKGFVK VRKPGKLPNV HASMEYGLEY GTDKLEMQKG
NGKKVIICDD LIATGGSMQA AAKLCNEVGY EVVGMACLVD LKALNSFSHD GMTVRSVIQF
DD