Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcr_0099 |
Symbol | |
ID | 3762233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiomicrospira crunogena XCL-2 |
Kingdom | Bacteria |
Replicon accession | NC_007520 |
Strand | + |
Start bp | 125830 |
End bp | 127785 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637784804 |
Product | von Willebrand factor, type A |
Protein accession | YP_390369 |
Protein GI | 78484444 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1240] Mg-chelatase subunit ChlD |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGAGA CTCTACTTAA TTGGGAGTGG CGTGATGCAA CGACCTTATG GTTTGTGTTG GCTCCGGTTA TTTGGGGGGC GGTGTCTTTC TGGTTGCGTC GACGACAAAG CAGTCAATAT GCCGAAAGTC ATTTATTGCC TTGGGCCAAA GTCACCGAGC AATCACTTTT CACCAGCGCC CAACATACAA TGGCTTTGGC GCACCAAAAG ACGTCAAAAA CGGCCAGGCC TGGGCGTTTT TTTCGTCGTC AATTTGGTCG CTTGTTTCAG CCTAAGTGGT TATTAACGGT GGCCTGGGTG TGTTTGATTG TTGCTTTGGC GGGGCCAAGA ACCTTAGTGC CAGCGCCGCA AGAGTCGACC CGTGCTGGTG TTGATATTTT GGTGGCACTG GATACGTCGC GCTCAATGTT GGTACAAGAT GTCTCTCCGA ATCGTTTTTT ATTGGCCAAA TCGCTGGTGG AATCGTTGGC CAATCGGTTG GAGCCAAGTG ATCGATTAGG TTTAATGGTG TATGCCGGAC GTCCACATCT GGTGTCGCCT TTGTCGTTTG ATCGTACGTT ATTTCAGCAC TATCTGGATT TGATGCGCCC GGGGATTTTA CCAACACTGG GGTCTCAGTT GGAGAGTGCA ATTGTCTTTG GTGCAGACCA TTTGCAGCAA ACCGCTGGGA AATCACAGGT GTTATTGGTT TTAACCAATG GAACCCCTGA ACCAGATCAG ATTGTTGCGG TTCCCGAGGC GTTAAAGGCT GTGGCAAATA CCGCTACTAA AGTGATTCTT GCAGGGGTCG GCAATTTACA ACCCAGCCGA ATTCCGAGTA TGGACCATCC AAGTGGGGCA TTGCACGCCA GTGGATTGTT GGTAACGTCG CGTTTGGAGC AGATTGCGTT ACAAAAATTA GCGACGCAAC TAAATGGTGT TTATTTGCGA GCCAATAATG ATGCCGCTTT CTTGGATCAA TTGGTGGATG AAGTCAGTGT GTTGGCGAAA AAACGTTCGT TTCAATCTGC GTTACCGATC TGGCAAGATC ATGCAATGCC CTTTATTTGG GTGGCTTTCT TTGCGTTGCT CTGGGCATTT TTTCCCGTTC GAATCGGGCG TTCTGTTCAG CACAATATTC TTGCTTTATT AGGTGTCGCT GTTTTGTCAA GTGTACTATT TTATGCGCCT GGCGCCTGGG CTCTTGATGA AACAGTGGGG CAAGAAATCC AAGCGTACAA AGCATTCAAT GCAAAAAACT ATGATGCCTC TCAACAAGCT TATGATGGCT TGCACAATTA TCGAGGTTGG TTCGGTGCAG GTGCGGCTGC TTACAAAGCA GAAGACTATG AATCTTCGGT ATTTTATTTT AGAGAAGCAG CCTTGAATGG CGTAACGGAC AAGCAACGCG CCCAAGCACT GTTCAATTTG GGAAACAGCT TTTACCAAGC TAATTTAACA CGCCAGGCCA TTGAGGCTTA TGAACAAGCG TTGGTGTATT GGCCCAATTA TGAAAAAGCT GAACATAATT TAGCGTTAGC CAAACGTAAG CGCCAAAAGC AAAAAGGTCA GCAACAAGAT CAGGAACAAG GCGACGGTCA AGGTGAAGGA AACACCAGTC GCGATGCCGA TGGCGCATTT TACGGAGGAC AAAAACCGAA CCAGGATGAA GCCGGAGAAG GTGTTTCAGG AGATGCCCCT GAAGGTGAAA AAGACGGCAA GGAATTTGTG CTGCCTGATG AACCGGAAGA AACCGATTTT TCGTTGTCGA CGGCGAATTC ACTGCAGCTA AATGATACGG CGAATGCCAT ATTGGATCAG CAGAAAAGAG TGTATAGAAT GGAAAAATTT GAGCATGAGA TGCAACGCGT GGAAGATAAT CAGGCTCGAT TATTACAAAA CATTTTTGAG CGGGAAGAAG GCTTTCAGGC CACACAGGAC CAATCGCATC CTTTGCCGGG AGTAAAACCA TGGTAA
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Protein sequence | MIETLLNWEW RDATTLWFVL APVIWGAVSF WLRRRQSSQY AESHLLPWAK VTEQSLFTSA QHTMALAHQK TSKTARPGRF FRRQFGRLFQ PKWLLTVAWV CLIVALAGPR TLVPAPQEST RAGVDILVAL DTSRSMLVQD VSPNRFLLAK SLVESLANRL EPSDRLGLMV YAGRPHLVSP LSFDRTLFQH YLDLMRPGIL PTLGSQLESA IVFGADHLQQ TAGKSQVLLV LTNGTPEPDQ IVAVPEALKA VANTATKVIL AGVGNLQPSR IPSMDHPSGA LHASGLLVTS RLEQIALQKL ATQLNGVYLR ANNDAAFLDQ LVDEVSVLAK KRSFQSALPI WQDHAMPFIW VAFFALLWAF FPVRIGRSVQ HNILALLGVA VLSSVLFYAP GAWALDETVG QEIQAYKAFN AKNYDASQQA YDGLHNYRGW FGAGAAAYKA EDYESSVFYF REAALNGVTD KQRAQALFNL GNSFYQANLT RQAIEAYEQA LVYWPNYEKA EHNLALAKRK RQKQKGQQQD QEQGDGQGEG NTSRDADGAF YGGQKPNQDE AGEGVSGDAP EGEKDGKEFV LPDEPEETDF SLSTANSLQL NDTANAILDQ QKRVYRMEKF EHEMQRVEDN QARLLQNIFE REEGFQATQD QSHPLPGVKP W
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