Gene Tcr_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTcr_0099 
Symbol 
ID3762233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiomicrospira crunogena XCL-2 
KingdomBacteria 
Replicon accessionNC_007520 
Strand
Start bp125830 
End bp127785 
Gene Length1956 bp 
Protein Length651 aa 
Translation table11 
GC content47% 
IMG OID637784804 
Productvon Willebrand factor, type A 
Protein accessionYP_390369 
Protein GI78484444 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1240] Mg-chelatase subunit ChlD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAGA CTCTACTTAA TTGGGAGTGG CGTGATGCAA CGACCTTATG GTTTGTGTTG 
GCTCCGGTTA TTTGGGGGGC GGTGTCTTTC TGGTTGCGTC GACGACAAAG CAGTCAATAT
GCCGAAAGTC ATTTATTGCC TTGGGCCAAA GTCACCGAGC AATCACTTTT CACCAGCGCC
CAACATACAA TGGCTTTGGC GCACCAAAAG ACGTCAAAAA CGGCCAGGCC TGGGCGTTTT
TTTCGTCGTC AATTTGGTCG CTTGTTTCAG CCTAAGTGGT TATTAACGGT GGCCTGGGTG
TGTTTGATTG TTGCTTTGGC GGGGCCAAGA ACCTTAGTGC CAGCGCCGCA AGAGTCGACC
CGTGCTGGTG TTGATATTTT GGTGGCACTG GATACGTCGC GCTCAATGTT GGTACAAGAT
GTCTCTCCGA ATCGTTTTTT ATTGGCCAAA TCGCTGGTGG AATCGTTGGC CAATCGGTTG
GAGCCAAGTG ATCGATTAGG TTTAATGGTG TATGCCGGAC GTCCACATCT GGTGTCGCCT
TTGTCGTTTG ATCGTACGTT ATTTCAGCAC TATCTGGATT TGATGCGCCC GGGGATTTTA
CCAACACTGG GGTCTCAGTT GGAGAGTGCA ATTGTCTTTG GTGCAGACCA TTTGCAGCAA
ACCGCTGGGA AATCACAGGT GTTATTGGTT TTAACCAATG GAACCCCTGA ACCAGATCAG
ATTGTTGCGG TTCCCGAGGC GTTAAAGGCT GTGGCAAATA CCGCTACTAA AGTGATTCTT
GCAGGGGTCG GCAATTTACA ACCCAGCCGA ATTCCGAGTA TGGACCATCC AAGTGGGGCA
TTGCACGCCA GTGGATTGTT GGTAACGTCG CGTTTGGAGC AGATTGCGTT ACAAAAATTA
GCGACGCAAC TAAATGGTGT TTATTTGCGA GCCAATAATG ATGCCGCTTT CTTGGATCAA
TTGGTGGATG AAGTCAGTGT GTTGGCGAAA AAACGTTCGT TTCAATCTGC GTTACCGATC
TGGCAAGATC ATGCAATGCC CTTTATTTGG GTGGCTTTCT TTGCGTTGCT CTGGGCATTT
TTTCCCGTTC GAATCGGGCG TTCTGTTCAG CACAATATTC TTGCTTTATT AGGTGTCGCT
GTTTTGTCAA GTGTACTATT TTATGCGCCT GGCGCCTGGG CTCTTGATGA AACAGTGGGG
CAAGAAATCC AAGCGTACAA AGCATTCAAT GCAAAAAACT ATGATGCCTC TCAACAAGCT
TATGATGGCT TGCACAATTA TCGAGGTTGG TTCGGTGCAG GTGCGGCTGC TTACAAAGCA
GAAGACTATG AATCTTCGGT ATTTTATTTT AGAGAAGCAG CCTTGAATGG CGTAACGGAC
AAGCAACGCG CCCAAGCACT GTTCAATTTG GGAAACAGCT TTTACCAAGC TAATTTAACA
CGCCAGGCCA TTGAGGCTTA TGAACAAGCG TTGGTGTATT GGCCCAATTA TGAAAAAGCT
GAACATAATT TAGCGTTAGC CAAACGTAAG CGCCAAAAGC AAAAAGGTCA GCAACAAGAT
CAGGAACAAG GCGACGGTCA AGGTGAAGGA AACACCAGTC GCGATGCCGA TGGCGCATTT
TACGGAGGAC AAAAACCGAA CCAGGATGAA GCCGGAGAAG GTGTTTCAGG AGATGCCCCT
GAAGGTGAAA AAGACGGCAA GGAATTTGTG CTGCCTGATG AACCGGAAGA AACCGATTTT
TCGTTGTCGA CGGCGAATTC ACTGCAGCTA AATGATACGG CGAATGCCAT ATTGGATCAG
CAGAAAAGAG TGTATAGAAT GGAAAAATTT GAGCATGAGA TGCAACGCGT GGAAGATAAT
CAGGCTCGAT TATTACAAAA CATTTTTGAG CGGGAAGAAG GCTTTCAGGC CACACAGGAC
CAATCGCATC CTTTGCCGGG AGTAAAACCA TGGTAA
 
Protein sequence
MIETLLNWEW RDATTLWFVL APVIWGAVSF WLRRRQSSQY AESHLLPWAK VTEQSLFTSA 
QHTMALAHQK TSKTARPGRF FRRQFGRLFQ PKWLLTVAWV CLIVALAGPR TLVPAPQEST
RAGVDILVAL DTSRSMLVQD VSPNRFLLAK SLVESLANRL EPSDRLGLMV YAGRPHLVSP
LSFDRTLFQH YLDLMRPGIL PTLGSQLESA IVFGADHLQQ TAGKSQVLLV LTNGTPEPDQ
IVAVPEALKA VANTATKVIL AGVGNLQPSR IPSMDHPSGA LHASGLLVTS RLEQIALQKL
ATQLNGVYLR ANNDAAFLDQ LVDEVSVLAK KRSFQSALPI WQDHAMPFIW VAFFALLWAF
FPVRIGRSVQ HNILALLGVA VLSSVLFYAP GAWALDETVG QEIQAYKAFN AKNYDASQQA
YDGLHNYRGW FGAGAAAYKA EDYESSVFYF REAALNGVTD KQRAQALFNL GNSFYQANLT
RQAIEAYEQA LVYWPNYEKA EHNLALAKRK RQKQKGQQQD QEQGDGQGEG NTSRDADGAF
YGGQKPNQDE AGEGVSGDAP EGEKDGKEFV LPDEPEETDF SLSTANSLQL NDTANAILDQ
QKRVYRMEKF EHEMQRVEDN QARLLQNIFE REEGFQATQD QSHPLPGVKP W