Gene Tbis_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_3161 
Symbol 
ID9169682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp3710932 
End bp3712758 
Gene Length1827 bp 
Protein Length608 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC transporter-like protein 
Protein accessionYP_003653748 
Protein GI296271116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.970833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGG TCAACCTCGA ATCCGTCTCC CACGCGTACG GGCCGAAGCG GCTGCTCCAT 
AACGTCTCCC TCGGCATCGG GGCGGACGAC CGCATCGGCG TCGTGGGACG CAACGGCTGC
GGGAAGACCA CGCTCATCTC GGTCATCTCG GGAGAGCTGC GGCCCGATGA GGGCCGGGTC
ACCCACGCCC GTGGGCTGCG GATCGGCAAG CTCTCCCAGC GGGATGAGCT CGACCCGGAC
GCGACCGTGC GCGACCTCGT GCTCGACGGC CGGCCCGAGC ACGAGTGGGC CGCCGACCCC
CGGGTGCGCG AGGTCGTCGC CGCCCTGCTC GGGAGCGTCG ATCTCGGGGC CAAGGCCGGA
GAGCTCTCCG GCGGCGAGCG CCGCCGGGTC GCCCTCGCCC GCGTGCTCGT CAGCGAGCAC
GATCTGATCA TCCTCGACGA GCCCACCAAC CACCTCGACA TCGAGGCGAT CACCTGGCTC
GCCCGGCACC TCAACGCCCG GCGTACCGCG GTGCTCGTGG TCACGCACGA CCGGTGGTTC
CTCGACGAGG TGACCACCCG CACCTGGGAG GTCGTGGACG GCTCGGTCGA GCGGTACGAG
GGCGGTTACG CCGCCTACGT GCTCGCCAAG GCCGAGCGGG CGCGCCTGGC GGAGGCGGCC
GAGGCGCGCC GGCAGAACCT GCTGCGGAAA GAGATCGCGT GGCTGCGCCG TGGGCCACCG
GCCCGGACGT CCAAGCCGAA GTTCCGCATC AAGGCCGCGG AGGCGCTGAT CGCCGACGTG
CCCCCGCCCC GCGAGACCGT GGAGCTGGTG CGGTTCGCCA CCGCGCGGCT CGGCAAGACC
GTGATCGACC TGGAGGACGT CACCCTCCAC GCCGACGGCA GCGGAGCGGG CCCGCGCGTG
CTCGACCGCT GCACCTACCG GTTCGGCCCG GGCGACCGGA TCGGCCTGAT CGGGGTGAAC
GGCGCGGGCA AGTCGACGGT GCTGCGGCTC CTCGCGCAGG AGATGCGGCC CACCTCCGGC
CGGGTGGTGC ACGGCAAGAC GGTACGGCTC GCCCACCTGT CGCAGGACCT GTCCGAGCTC
GATCCGCGGC GGCGGGTGCT GGAGTGCGTC GAAGAGGTCC GCAAGCACGT CCGCGTGGGC
AAGAAGGAGT GGTCGGCCTC CCAGCTCCTG GAGCGCCTCG GGTTCCGCGG TGAGGCGCAG
TGGAAGCCGG TCGGCGACCT GTCCGGCGGG GAGCGGCGCC GGCTCCAGCT CCTCCGGCTG
ATCATGGCCG AGCCGAACGT GCTCCTGCTC GACGAGCCCA CCAACGACCT GGACATCGAG
ACGCTCAACG AGCTGGAGGA CCTGCTCGAC GGCTGGCCGG GCACGCTCGT GGTGGTCAGC
CACGACCGCT ACTTCCTCGA GCGGGTGACC GACCACTGCG TGGCCCTGCT CGGCGACGGC
AAGCTGTCGC TGCTGCCCGG CGGGGTGGAC GAGTACCTGC GGCGGCGGGC GGCCGGGCAG
GCCGTGTCCG CCCGGGCCGC CTCCGGCTCT TCGGCCGCGG CCGCCGGGGG CCGGGGGGAC
GCGCGCGCGG CTGCCCGGAA CGGTGCCCAG GCCGGCACGC TCTCGGCGAA GGAGCAGCGG
GAGCTGCAGA AGGAGCTGAG CCGGCTGGAG CGGCAGCTCG ACCGGCTCAG CGAGCAGGAG
GCCCGGCTGC ACGCCGAGAT GGCCGCGGCG GCCACCGACT ACGCACGCCT GGCCGAGCTC
GACGCCGAGC TGCGCGAGGT GGTCGCGCAG AAGGAGACCG TCGAGGCCGA ATGGCTCGGC
ATCGCCGAGC GGCTGGAGGC CGGCTGA
 
Protein sequence
MNLVNLESVS HAYGPKRLLH NVSLGIGADD RIGVVGRNGC GKTTLISVIS GELRPDEGRV 
THARGLRIGK LSQRDELDPD ATVRDLVLDG RPEHEWAADP RVREVVAALL GSVDLGAKAG
ELSGGERRRV ALARVLVSEH DLIILDEPTN HLDIEAITWL ARHLNARRTA VLVVTHDRWF
LDEVTTRTWE VVDGSVERYE GGYAAYVLAK AERARLAEAA EARRQNLLRK EIAWLRRGPP
ARTSKPKFRI KAAEALIADV PPPRETVELV RFATARLGKT VIDLEDVTLH ADGSGAGPRV
LDRCTYRFGP GDRIGLIGVN GAGKSTVLRL LAQEMRPTSG RVVHGKTVRL AHLSQDLSEL
DPRRRVLECV EEVRKHVRVG KKEWSASQLL ERLGFRGEAQ WKPVGDLSGG ERRRLQLLRL
IMAEPNVLLL DEPTNDLDIE TLNELEDLLD GWPGTLVVVS HDRYFLERVT DHCVALLGDG
KLSLLPGGVD EYLRRRAAGQ AVSARAASGS SAAAAGGRGD ARAAARNGAQ AGTLSAKEQR
ELQKELSRLE RQLDRLSEQE ARLHAEMAAA ATDYARLAEL DAELREVVAQ KETVEAEWLG
IAERLEAG