| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_3126 |
|---|
| Symbol | |
|---|
| ID | 9169645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | - |
|---|
| Start bp | 3669182 |
|---|
| End bp | 3670462 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily protein |
|---|
| Protein accession | YP_003653713 |
|---|
| Protein GI | 296271081 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.000813228 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGAG CGCGACCGGC GGCCGGCGCG GTGCGGCACG CCCCGCCCCC GGAAGCCGCC
CGTGTGCAGC GCCGCACGAT GACCGTGCTG ACGGTCATGC AGGCCATCGG CACGGTCGGC
GTGGGCATCG CCCCCTCGAT CGGCGTGCTG CTCGCCGGAG AGGTCACCGG CAGCGACGCC
TGGGCGGGTC TCGCCCGCAC CGCGAGCATC CTCGGCGCGG CCCTGCTCGG CCTGCCGCTG
GGGAACCTCG CCGCCCGGTA CGGCCGCCGC GCCGCCCTCA CCGCCGGGTG GTGGACCGCC
GCGGTGGGCA GCGCGCTGCT CGTCGCCGCC GCCCAGGCCG ACCTCGTCGT CCCGCTGTTC
CTCGGGCTGC TGTCCATCGG CGCCGGCACC GCCGTCAGCC TGCAGGCCCG GTTCGCCGCC
ACGGACCTCG CCGCGCCGCA GCACGCGGGC CGTTCGCTCG CCCAGGTGGT GTGGGCGGGG
ACCATCGGAT CGGTCCTCGG CCCCAGCCTC GGCGCCCCCG GCCGGTTCGT CGGTGACCTC
GTCGGCCTGA ACGTTTACGC GGGCGCGTTC CTCATCGCCA CCGTCTGCCT CGCCGTGGCC
GGGCTGATCG TCTTCGCCTG GCTGCGCCCG GACCCGTTGC GGCTGCGGGA GCGGTACGCG
GCGCCCACCC CGGCGCCGCC GGGGAAGGCG TCCGGCCGGA TCAGGCCGAT GCTCGCCGAG
CTGGGCGGGA ATCCGGTGGC GCGGTTCGCC GTCATCGCGA TCCTCACCGC CCACGGCGTG
ATGCTCGGGG TCATGACGGC CACCCCGGTC CATCTCGCCC ACCACGGCGG GTCGATCACG
ATGATCGGGA TCACCATCAG CCTGCACGTC CTCGGCATGT TCGCGTTCTC GCCCGTGGTC
GGCCACCTCG CGGACCGGCT CGGCCCGCGC CGCACCATCG CCGCCGGGAC CTGGATCCTC
GTCGCCTCGC TCGTCATCGG CGCGATCCGG CCCGCCGACA CCGCGTGGAT CGTCGTCTCG
CTCTTCCTGC TCGGTCTCGG CTGGTCGTTC GTCACCGTGG CGGCCTCGGC CGAGTTCGGC
TCGGCCGTCT CCGGTGAGGC CCGGGCGTCC GCCCAGGGCG GCGTCGACGC CCTGTCGAAC
CTGTGCGGGG CGGTCGCGGC GCTCGCCGCG GGCCCGGCCC TGAGCGTCAC CGGCTTCTCC
GGGCTCTCCG TCCTGGCGAT CGCCGCGCTG GTGCCGCTGC TGATCCTGAC GGCGCGGAAG
CGCGCCCGGG GATCGGGGTG A
|
|---|
| Protein sequence | MDGARPAAGA VRHAPPPEAA RVQRRTMTVL TVMQAIGTVG VGIAPSIGVL LAGEVTGSDA
WAGLARTASI LGAALLGLPL GNLAARYGRR AALTAGWWTA AVGSALLVAA AQADLVVPLF
LGLLSIGAGT AVSLQARFAA TDLAAPQHAG RSLAQVVWAG TIGSVLGPSL GAPGRFVGDL
VGLNVYAGAF LIATVCLAVA GLIVFAWLRP DPLRLRERYA APTPAPPGKA SGRIRPMLAE
LGGNPVARFA VIAILTAHGV MLGVMTATPV HLAHHGGSIT MIGITISLHV LGMFAFSPVV
GHLADRLGPR RTIAAGTWIL VASLVIGAIR PADTAWIVVS LFLLGLGWSF VTVAASAEFG
SAVSGEARAS AQGGVDALSN LCGAVAALAA GPALSVTGFS GLSVLAIAAL VPLLILTARK
RARGSG
|
|---|
| |