Gene Tbis_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_2010 
Symbol 
ID9168504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp2328154 
End bp2329353 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content70% 
IMG OID 
Productthiamin pyrophosphokinase catalytic region 
Protein accessionYP_003652615 
Protein GI296269983 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.272483 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAGG TCCCGAGCTT GAACGTTCCG GGCCTCCGCC GCAGGAAGGT CGAGGACCTT 
CCGGGAATCA CCGCGGTGGC GAGAGTCGAC CGCCGGACGA AGAGGCTCAC CAAGCGCCTC
CAGCCCGGAG AGATCGCGAT CATCGACCAC GTCGACCTCG ACCGCGTCAG CGCGGAGGCC
CTGGTCGCGT GCGGCGCGGC CGCGGTGATC AATGTGGCGC CCAGCATCAG CGGGCGCTAC
CCCAACATGG GACCCAAGAT CCTCCTGGAC GCCGGGATCC CGCTGATCGA CGACGCGAGC
CCGGAGCTGT TCGAGCGGGT CGCCGACGGT GACGTGATCC GCGTCCGGGA CGGGATGATC
TACCTCGGCG ACGAGCTGGT CGGCAAGGGC CAGCCGCAGA CGGCCGAGTC GGTCGAGGCC
GCGATGACCG AGGCGAGGGC CGGCCTGTCC GCCCAGATCG AGGCGTTCGC CGCCAACACC
ATGGAGTACA TCCGGCGGGA GCGCGACCTC CTCATCGACG GCATCGGCGT CCCCGACGTG
CGGACGGTCA TGGAGGGCCG GCACGTCCTC ATCGTGGTGC GCGGCTACCA CTACAAGGAG
GACCTCGCCA CGCTCCGTCC CTACATCCGG GAGTACCGTC CCATCCTGAT CGGGGTCGAC
GGCGGTGCCG ACGCCCTGCT CGAGGCCGGG TACGTGCCCG ACATGATCGT CGGCGACTTC
GACTCCGTGT CGGAGAAGGC GCTGTTCAGC GGCGCCGAGC TGGTGGTCCA CGCCTACCGC
GACGGCCGCG CCCCCGGGCT GGAGCGGGTG CGCCGGCTCG GCCTGGAGGC CGTGGTCTTC
CCGGCGACGG GCACGAGCGA GGACGTCGCC ATGCTCCTGG CCGACGCCAA GGGCGCCTCG
CTGATCGTCG CCGTCGGCAC CCACTGGACG CTCGACGAGT TCCTCGACAA GGGCCGTTCC
GGCATGGCGA GCACGTTCCT CACCCGGCTG CGGGTGGGCA GCAAGCTCGT GGACGCCAAG
GGGGTGAGCC GGCTCTACCG CAGCCGGATC TCCACCTCGT CCCTGCTGCT GCTCGTGGCC
ACCACGCTGC TCACCATCGG GGTGGTGCTC TCGGTCTCCC CCATCGGCCA GGTCTGGCTG
AACGGCTTCC TCGTCGCCTG GAACGGCTTC ATCTTCTGGT TGGTCGGACT CTTCTCGTGA
 
Protein sequence
MMKVPSLNVP GLRRRKVEDL PGITAVARVD RRTKRLTKRL QPGEIAIIDH VDLDRVSAEA 
LVACGAAAVI NVAPSISGRY PNMGPKILLD AGIPLIDDAS PELFERVADG DVIRVRDGMI
YLGDELVGKG QPQTAESVEA AMTEARAGLS AQIEAFAANT MEYIRRERDL LIDGIGVPDV
RTVMEGRHVL IVVRGYHYKE DLATLRPYIR EYRPILIGVD GGADALLEAG YVPDMIVGDF
DSVSEKALFS GAELVVHAYR DGRAPGLERV RRLGLEAVVF PATGTSEDVA MLLADAKGAS
LIVAVGTHWT LDEFLDKGRS GMASTFLTRL RVGSKLVDAK GVSRLYRSRI STSSLLLLVA
TTLLTIGVVL SVSPIGQVWL NGFLVAWNGF IFWLVGLFS