Gene Tbis_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1901 
Symbol 
ID9168395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp2199462 
End bp2201141 
Gene Length1680 bp 
Protein Length559 aa 
Translation table11 
GC content67% 
IMG OID 
Productcytochrome c oxidase, subunit I 
Protein accessionYP_003652506 
Protein GI296269874 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0984776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.277007 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTGC GGACTAGGCA GACCACCACC GTGACGCCCA AGGGACGGCG ACCAGGCACG 
GTGATCGTCT CCTGGCTGAC GAGCACCGAT CACAAGGTGA TCGGTCACCT GTACCTGATC
ACCGCCTTCG TGTTCTTCCT GATCGGGGGC GCGATGGCGC TGGTGATCAG GGCCGAGCTC
ACCGTGCCGG GGCTGCAGTT CGTCAGCAAC CTCCGGTACA ACGAGCTGTT CACCATGCAC
GGCACGATCA TGCTGCTGCT GTTCGCCACC CCGCTCTTCG CCGGGTTCGC GAACGCGATC
ATGCCGCTGC AGATCGGCGC CCCGGATGTG GCGTTCCCCC GGCTCAACAT GGTGAGCTAC
TGGCTCTTCC TGTTCGGCGG CATCATCACG CTGAGCGGAT TCTTCATGGG CGGGGCGCCC
TCCTTCGGCT GGACGGGGTA CACGCCGCTC TCCGAGCGCG AGTACACCCC GCAGCTCGGC
GGCGACCTGT GGATCATGGG GCTGGTGCTC GCCGGGGTGG GGACCATCCT CGGCGCGGTC
AACTTCATCA CCACGATCAT CACCAGGCGG GCGCCCGGGA TGAGCACGTT CCGGATGCCG
ATCTTCACGT GGAACGTGCT GCTCACCTCG GTCCTGGTGC TCCTCACCTT CCCGGTGCTC
GCCGCCGCGC TGCTCGCGCT CGAGGCCGAT CGCAAGCTCG GCACCCGCAT CTACGACCCG
GAGCACGGCG GGCCGCTCAT CTGGCAGCAC CTGTTCTGGT TCTTCGGCCA CCCCGAGGTC
TACATCGTGG CGCTGCCGTT CTTCGGGATC ATCACCGAGG TGATCCCGGT CTTCAGCCGC
AAGCCGCTCT TCGGGTACAT CGGCATGGTC GGCGCCACGA TATCGATCAC CGTGCTCTCC
ATGGCGGTGT GGGCCCACCA CATGTTCGCC ACCGGCCGGG TGAACCTGCC GTTCTTCGCC
CTGATGACGT TCCTGATCGC CGTGCCCACC GGGGTGAAGT TCTTCAACTG GATCGGCACC
ATGTGGCGGG GCCACCTCAG CTTCGAAGCG CCGATGATGT TCGCGATCGG GTTCCTGCTC
ACGTTCCTGA TCGGCGGGCT GACCGGGGTG ATCCTCGCCT CTCCCCCGCT CGACTTCCAC
GTGCACGACA GCTACTTCGT GGTGGCCCAC TTCCACTACG TGCTGTTCGG CACCGTGGTG
TTCGCCATGT TCTCCGGCTT CTACTTCTGG TGGCCGAAGC TGACCGGCAC GATGCTGGAC
GATCGCCTGG GGCAGATCCA CTTCTGGATG GTCTTCCTCG GCTTCCAGCT CACCTTCCTG
GTGCAGCACT GGCTGGGGGT CTCGGGGATG CCCCGCCGGT ACGCGGACTA CTCCGCGGTC
GACGGCTTCA CCGGGCTGAA CGTGGTCTCG AGCGTGGGGG CGCTCGTGCT CGGCCTGTCG
AACCTGCCGT TCTTCTACAA CGTCTGGAAG ACGGCCCGGC GCGGGGAGCG GGTCACCACC
GACGACCCGT GGGGCGCCGG GGGCTCCCTG GAGTGGGCCA CCTCCTGCCC GCCGCCCCGG
CACAACTTCA CCCGGCTCCC GCAGATCCGC TCCATCCGGC CGGCGTTCGA CCTGCACTAC
CCGCCGGCGG CCGGCGGCGA GGCGAGCCCG CCCCCGGAGA CGAGGTCCCT GGACCGCTGA
 
Protein sequence
MAVRTRQTTT VTPKGRRPGT VIVSWLTSTD HKVIGHLYLI TAFVFFLIGG AMALVIRAEL 
TVPGLQFVSN LRYNELFTMH GTIMLLLFAT PLFAGFANAI MPLQIGAPDV AFPRLNMVSY
WLFLFGGIIT LSGFFMGGAP SFGWTGYTPL SEREYTPQLG GDLWIMGLVL AGVGTILGAV
NFITTIITRR APGMSTFRMP IFTWNVLLTS VLVLLTFPVL AAALLALEAD RKLGTRIYDP
EHGGPLIWQH LFWFFGHPEV YIVALPFFGI ITEVIPVFSR KPLFGYIGMV GATISITVLS
MAVWAHHMFA TGRVNLPFFA LMTFLIAVPT GVKFFNWIGT MWRGHLSFEA PMMFAIGFLL
TFLIGGLTGV ILASPPLDFH VHDSYFVVAH FHYVLFGTVV FAMFSGFYFW WPKLTGTMLD
DRLGQIHFWM VFLGFQLTFL VQHWLGVSGM PRRYADYSAV DGFTGLNVVS SVGALVLGLS
NLPFFYNVWK TARRGERVTT DDPWGAGGSL EWATSCPPPR HNFTRLPQIR SIRPAFDLHY
PPAAGGEASP PPETRSLDR