Gene Tbis_1425 details

Gene Information

• Locus tag: Tbis_1425
• ID: 9167917
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermobispora bispora DSM 43833
• Kingdom: Bacteria
• Replicon accession: NC_014165
• Strand: +
• Start bp: 1613732
• End bp: 1617256
• Gene Length: 3525 bp
• Protein Length: 1174 aa
• Translation table: 11
• GC content: 67%
• Product: DNA polymerase III subunit alpha
• Protein accession: YP_003652036
• Protein GI: 296269404

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 0.59393
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGCGAAT CGTTTGTACA TCTGCACGTG CACACCGAGT ACTCGATGCT CGACGGTGCG 
GCCCGGTTGA AGCAGATGTT CAAACTCGTG GGCGAGCTCG GCATGCCCGC GATCGCGATC 
ACCGACCACG GCAACCTGCA CGGGTCGTAC GACTTCTACA AGCAGGCGAC CGCCGCCGGG 
ATCAAGCCCA TCATCGGCAT CGAGGCGTAC GTCGCGCCCG AGTCGCGGTT CAACAAGCAG 
CCGGTCCTGT GGGGTGAGCC GCACCAGCGG GGCGACGACG TGTCGGCCGG TGGCTTCTAC 
ACCCATCTGA CGATCTGGGC GCGGAACAAG ACCGGCCTGC ACAACCTGAT CAAGCTGAGC 
TCGCGCGCGT ACACCGAAGG GTTCGTCCGC AAGTGGGCCC GCATGGACGC CGAGCTCCTC 
GCCGAGCACG CCGAAGGGCT CATGGCGAGC ACCGGCTGCC CCTCCGGCGA GGTGCAGACC 
CGGCTCCGCC TCGGCCAGTA CGACGAGGCG CTCAAGGCGG CGGCCAAGTA CCAGGAGATC 
TTCGGGAAGG AGAACTTCTA CCTGGAGCTC ATGGACCACG GCCTCGACAT CGAGCGCCGG 
GTCCGGGACG ACCTGGTCCG GATCGGCCGC ACGCTCGGCC TGCCCCCGGT GGTCACCAAC 
GACTCGCACT ACACCTACCA GTCGGACGCG GCGGGCCACG ACGCCCTCCT GTGCATCCAG 
ACCGGCAAGC AGCTCAACGA CCCGGACCGG TTCCGGTTCG AGGGCACCGA GTACTACATC 
AAGACCCCCG AGGAGATGCG GGCCCTCGAC AGCTCCGACC TGTGGCAGGA GGGCTGCCGC 
AACACGCTGG CGATCGCCGA GAAGGTCGAC CCCACCGGGT TCTTCGAGTA CAAGAACCTG 
ATGCCGACCT TCCCCATCCC GGAGGGCAAG ACCGAGGAGG AGTACTTCCG GGAGAAGGTC 
TGGGAGGGCA TGCGCCGCCG CTTCCCGGAC GGGGTGGACG ACGAGCACCG GGAGCTGGTC 
GAGAAGGAGA TCAGCGTCAT CGTCCAGATG GGCTTCCCGA GCTACTTCCT CGTCGTCGCC 
GACTTCATCA TGTGGGCGAA GAACAACGGC ATCCGGGTGG GCCCCGGGCG TGGCTCGGCC 
GCCGGTTCGC TCGTCGCCTA CGCGCTCGGC ATCACCGACC TCGACCCCAT CCCGCACGGC 
CTCATCTTCG AGCGCTTCCT CAACCCCGAG CGGGTGTCCA TGCCCGACAT CGACGTGGAC 
TTCGACGAGC GCCGGCGGGC GGACGTCATC CGGTACGTCA CCGAGAAGTG GGGCGCCGAC 
AAGGTCGCGA TGATCGCCAC CTTCGGCACC ATCAAGGCGA AGGCCGCCAT CAAGGACGCG 
GCCCGCGTCC TGGGCTACCC GTACGCGCTC GGTGACCGGA TCACCAAGGC GTTCCCGCCC 
GCGGTGATGG GCAAGGACAT CCCGCTGTCG GGCATCTTCG ACCCCGAGCA CCCCCGCTAC 
CACGAGGCGG GCGAGCTGCG GAAGATGTAC GAGGAGGATC CCGACGTCAA GGCGGCGATC 
GACCTCGGCC GGGGCCTGGA GGGCCTGATC CGGCAGACCG GCGTCCACGC GGCCGGCGTG 
ATCATGTCGT CGGAGCCGCT CACCGACCAC ATCCCGATCA TGCGCCGCGA CTCCGACGGC 
GCGATCATCA CGCAGTTCGA CTACCCGACC TGCGAGGCGC TCGGCCTCCT CAAGATGGAC 
TTCCTCGGGC TGCGCAACCT CACGATCATC GACGACTGCC TGAAGATGAT CGAGGCGAAC 
ACCGGGGAGA AGATCGACCT GCTCGAGCTC CCGCTCGACG ACGCCAAGAC GTACGAGCTG 
CTCGCGCGGG GCGACACGCT CGGGATCTTC CAGCTCGATG GCGGCGGCAT GCGCTCCCTG 
CTGCGGCTGA TGAAGCCCGA CAACTTCGAG GACATCTCCG CGGCCCTCGC GCTGTACCGG 
CCGGGTCCGA TGGGCGCCAA CTCGCACATC AACTACGCGC TGCGCAAGAA CGGCCAGCAG 
GAGATCACGC CCATCCACCC CGAGCTCGAG GAGCCGCTCA AGGACATCCT CAGCACCACG 
TACGGGCTCA TCGTCTACCA GGAGCAGGTC ATGGCCATCG CGCAGAAGGT GGCCAACTAC 
ACGCTCGGCG GCGCCGACCT GCTCCGCCGC GCCATGGGCA AGAAGAAGAA GGAGGAGCTC 
GACCGGCAGT TCGAGTTCTT CGAGAAGGGC ATGAAGGAGA ACGGGTTCTC CGACGAGGCC 
ATCCGGGCCC TGTGGGACAT CCTCGTCCCG TTCTCCGACT ACGCCTTCAA CAAGGCGCAC 
ACCGCCGCGT ACGGCCTGGT GTCCTACTGG ACGGCCTACC TCAAGGCGAA CTACCCGGCC 
GAGTACATGG CCGCGCTCCT CACCTCGGTC AAGGACGACA AGGACAAGAG CGCGCTGTAC 
CTGAACGAGT GCCGGCGGAT GGGCATCAAG GTGCTCCCGC CGGACGTCAA CGACTCCGAC 
TTCGACTTCA CCCCGCGCGG CGGGGACATC CGGTTCGGCC TGTCGGCGGT CCGGAACGTC 
GGCGCCAACG TGGTGGACGG CATCATCAAG GCCCGCAAGG AGAAGGGCCG GTTCACCGAC 
TTCGCCGACT TCCTGCGGAA GGTGCCCGCG CAGGTCTGCA ACAAGCGGGT GATCGAATCG 
CTGATCAAGG CGGGCGCCTT CGACTCGCTC GGCCACGAGC GCAAGGGCCT GTTCATGATC 
CACGAGCAGG CGGTGGACGC GGTCATCGAC ATCAAGAAGA ACGAGGCGAT CGGCCAGGAC 
TCGCTCTTCG GGGCGGTCGA GGGCGCCGAG GACACCACCT TCGACGTGCA GGTCCCGCCG 
GGGGAGTGGG ACAAGCGCAC GCTGCTGCAG TTCGAGCGGG AGATGCTCGG GCTGTACGTG 
TCGGACCACC CGCTGCTCGG CGTGGAGCAC ATCCTCGCGG CCGGGTCGGA CTGCTCGATC 
GCCGCGCTCC AGGACGAGAG CCACCCCGAC GGGCAGGTCG TCACCGTCGG CGGCATCCTC 
TCCGGGCTGC AGCGCAAGAT CACCAAGAAG GGCGACACCT GGGTGCTCGC CACCCTCGAG 
GACCTCGAGG GCTCCATCGA GGTGATGATC TTCCCGTCCA CCTACCAGCT CTGCGCCACG 
ATCCTCGCCG AGGACGCGAT CGTCTTCGTC AAGGGCCGGG TCGACAAGCG GGAGGAGGTC 
GCCAAGCTCA TCGCGATGGA GGTGACCGTC CCCGACCTCA GCCAGTCGTC CGGGAACGGG 
CCGCTGGTGG TGAGCATGCC GCTCTCCCGG TGCACCCCGC CGGTGGTCGG CCGGCTCAAG 
GAGGTGCTCA CCACGCACCC CGGCACCACC GAGGTGCACC TGCAGCTCCA CAACGGGTCG 
CGCACCACGG TGGTCCGCCT CGACGACAGG CTCCGGGTGA CCCCGTCACC GGCCCTCATG 
GGCGACCTCA AGCAGCTCCT CGGCCCCGCC TGCCTCGGCG CCTGA 

 

Protein sequence

MGESFVHLHV HTEYSMLDGA ARLKQMFKLV GELGMPAIAI TDHGNLHGSY DFYKQATAAG 
IKPIIGIEAY VAPESRFNKQ PVLWGEPHQR GDDVSAGGFY THLTIWARNK TGLHNLIKLS 
SRAYTEGFVR KWARMDAELL AEHAEGLMAS TGCPSGEVQT RLRLGQYDEA LKAAAKYQEI 
FGKENFYLEL MDHGLDIERR VRDDLVRIGR TLGLPPVVTN DSHYTYQSDA AGHDALLCIQ 
TGKQLNDPDR FRFEGTEYYI KTPEEMRALD SSDLWQEGCR NTLAIAEKVD PTGFFEYKNL 
MPTFPIPEGK TEEEYFREKV WEGMRRRFPD GVDDEHRELV EKEISVIVQM GFPSYFLVVA 
DFIMWAKNNG IRVGPGRGSA AGSLVAYALG ITDLDPIPHG LIFERFLNPE RVSMPDIDVD 
FDERRRADVI RYVTEKWGAD KVAMIATFGT IKAKAAIKDA ARVLGYPYAL GDRITKAFPP 
AVMGKDIPLS GIFDPEHPRY HEAGELRKMY EEDPDVKAAI DLGRGLEGLI RQTGVHAAGV 
IMSSEPLTDH IPIMRRDSDG AIITQFDYPT CEALGLLKMD FLGLRNLTII DDCLKMIEAN 
TGEKIDLLEL PLDDAKTYEL LARGDTLGIF QLDGGGMRSL LRLMKPDNFE DISAALALYR 
PGPMGANSHI NYALRKNGQQ EITPIHPELE EPLKDILSTT YGLIVYQEQV MAIAQKVANY 
TLGGADLLRR AMGKKKKEEL DRQFEFFEKG MKENGFSDEA IRALWDILVP FSDYAFNKAH 
TAAYGLVSYW TAYLKANYPA EYMAALLTSV KDDKDKSALY LNECRRMGIK VLPPDVNDSD 
FDFTPRGGDI RFGLSAVRNV GANVVDGIIK ARKEKGRFTD FADFLRKVPA QVCNKRVIES 
LIKAGAFDSL GHERKGLFMI HEQAVDAVID IKKNEAIGQD SLFGAVEGAE DTTFDVQVPP 
GEWDKRTLLQ FEREMLGLYV SDHPLLGVEH ILAAGSDCSI AALQDESHPD GQVVTVGGIL 
SGLQRKITKK GDTWVLATLE DLEGSIEVMI FPSTYQLCAT ILAEDAIVFV KGRVDKREEV 
AKLIAMEVTV PDLSQSSGNG PLVVSMPLSR CTPPVVGRLK EVLTTHPGTT EVHLQLHNGS 
RTTVVRLDDR LRVTPSPALM GDLKQLLGPA CLGA