Gene Tbis_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1139 
Symbol 
ID9167629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1298127 
End bp1299713 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content69% 
IMG OID 
Productmalate synthase A 
Protein accessionYP_003651754 
Protein GI296269122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.749364 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTTG AGATCAAGGC ACCTATGCAC GAGGGGTTCG ACGAGATCCT CACGCCGAAG 
GCCCTCGAGT TCGTCGCCAC CCTGCACCGC GAGTTCAACC CCGAGCGCAA GCGGCTCCTC
CGGCTCCGCC AGGAGCGCCA GGCCGAGCTC TCGGCGGGCG GCACGCTCCG CTTCCTTCCC
GAGACCGAGC ACATCCGCAA CGACCCCGAC TGGCGGGTCG CCCCGCCCGC GCCGGGCCTG
GTCGACCGGC GGGTGGAGAT CACCGGCCCG GTCGACCGGA AGATGACCAT CAACGCGCTC
AACTCCGGCG CAAAGGTCTG GCTCGCCGAC TTCGAGGACG CCAACACCCC CACCTGGGAG
AACACGATCA GGGGCCAGAT CAACCTGCGT GACGCGCTCG ACCGGACGAT CGACTTCTCG
ATCGGCGAGA AGCGCTACGC GCTCAAGCCC GACGAGGAGC TCGCCACGAT CGTGGTCCGG
CCGCGCGGCT GGCACCTGCC CGAGAAGCAC GTGCTGGTCG ACGGCGAGGA GATCTCCGGC
TCGCTGTTCG ACTTCGGCCT CTACTTCTTC CACTGCGCCA AGCGGCAGAT CGACAAGGGC
AAGGGCCCGT ACTTCTACCT GCCGAAGCTG GAGTCGCACC TTGAGGCGCG GCTGTGGAAC
GACGTGTTCG TCCGCGCCCA GGAGCTGCTC GGCATCCCGC GCGGCACGAT CCGGGCGACC
GTGCTGATCG AGACCATCAC GGCCGCCTTC GAGATGGAGG AGATCCTCTA CGAGCTGCGC
GAGCACTCGG CGGGGCTCAA CGCCGGCCGA TGGGACTACC TGTTCAGCGT GATCAAGAAG
TTCCGCACCC GCGGCCGGGA GTTCCTGCTG CCGGAGCGGA ACGCGGTGAC CATGACCGCG
CCGTTCATGC GGGCCTACAC CGAGCTGCTC GTCCGCACCT GCCACAAGCG CGGCGCTCAC
GCGATCGGCG GCATGGCCGC GTTCATCCCG AACCGCCGCG ACCCGGAGAT CAACCGGGTC
GCCCTGGAGA AGGTGCGGGC CGACAAGCAG CGCGAGTCCA ACGACGGCTT CGACGGCTCG
TGGGTGGCCC ACCCCGACCT GGTCCCGGTC TGCCGCGAGG TGTTCGACCA GGTGCTCGGC
GACCGGCCGA ACCAGCTCGA CCGGCTGCGC GAGGACGTCA GCGTCACCGC GGAGGACCTC
CTCGCCGTGT CGAAGACGCC GGGGCAGATC ACCGAGGCCG GGCTGCGCAA CAACGTCGAC
GTCGGGATCC GCTACCTCGC CGCCTGGATG GGCGGGCAGG GCGCGGCCGC CATCCACAAC
CTGATGGAGG ACGCGGCCAC CGCCGAGATC TGCCGGTCGC AGGTCTGGCA GTGGATCCAC
AACGACGTCG ACCTCGCCGA CACCGGCGAG CGGGTGACCC GCGAGCTCGT CGAGCGGGTC
ATCGAGGAGG AGCTCGCCAA GATCGCCCAG GAGCCCGGCT ACGACGCCGA CCTCTACGCC
AAGGCGACCG AGCTGTTCAA GGAGGTCGCC CTTGACGACG ACTTCGTCGA GTTCCTTACG
CTCCCGGCAT ACGCCCGCCT GCCGTAG
 
Protein sequence
MSVEIKAPMH EGFDEILTPK ALEFVATLHR EFNPERKRLL RLRQERQAEL SAGGTLRFLP 
ETEHIRNDPD WRVAPPAPGL VDRRVEITGP VDRKMTINAL NSGAKVWLAD FEDANTPTWE
NTIRGQINLR DALDRTIDFS IGEKRYALKP DEELATIVVR PRGWHLPEKH VLVDGEEISG
SLFDFGLYFF HCAKRQIDKG KGPYFYLPKL ESHLEARLWN DVFVRAQELL GIPRGTIRAT
VLIETITAAF EMEEILYELR EHSAGLNAGR WDYLFSVIKK FRTRGREFLL PERNAVTMTA
PFMRAYTELL VRTCHKRGAH AIGGMAAFIP NRRDPEINRV ALEKVRADKQ RESNDGFDGS
WVAHPDLVPV CREVFDQVLG DRPNQLDRLR EDVSVTAEDL LAVSKTPGQI TEAGLRNNVD
VGIRYLAAWM GGQGAAAIHN LMEDAATAEI CRSQVWQWIH NDVDLADTGE RVTRELVERV
IEEELAKIAQ EPGYDADLYA KATELFKEVA LDDDFVEFLT LPAYARLP