Gene Tbis_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbis_1122 
Symbol 
ID9167612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermobispora bispora DSM 43833 
KingdomBacteria 
Replicon accessionNC_014165 
Strand
Start bp1278090 
End bp1278956 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content69% 
IMG OID 
Productpolar amino acid ABC transporter inner membrane subunit 
Protein accessionYP_003651737 
Protein GI296269105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.71976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.228753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGGG CGACGGTCCT CTACGACGTC CCCGGGCCGA AGGCCCGGCT GCGCAACAAC 
GTCCTCACCT TCGCCTTCGG GGTGCTGTTC CTCTTCGTCG CGTACTTCAT CTGGCTGAAG
TTCGACGAGA AGGGGCAGTG GGAGCCCGAC CTCTGGCGGC CGTTCCTCCA GGCGGACACC
TGGACCGAGC TGATCCTTCC CGGGCTGTGG AACACCCTGG CCGCGGCCCT GGTCGCCGCG
GTGCTCGCGC TCGCGTTCGG CACCGTGTTC GGCATCGCCC GGCTGTCCGA CCACTGGTGG
ATCCGGATCC CGGCCGGGGC CATCGCGGAG TTCTTCCGCG CGGTCCCGGT GCTCATGATG
ATCTTCTTCG CCCAGTACGG CGGGAGCCTG CTGGGGCTGG TCGTCAGCGA GTTCGCGGCG
GTGGTGTTCG GGCTCACCGT CTACAACGGC TCGGTGCTGG CGGAGATCGT GCGGGCGGGG
ATCCGGGCGG TGCCGCGCGG GGAGTCCGAG GCGGGCTACG CGATGGGGCT GCGGAAGAAC
CAGGTCATGC GGCTGATCCT GCTGCCGCAG GCGATCACCT CGATGATGCC GGCGATCGTC
AGCCAGCTCG TCGTGCTGCT CAAGGACACC GCGCTCGGGT TCATCGTGGC CTATGCGGAC
CTGCTCAACG CCGGGGCCCG GGTCGTGCCG GCGAACTACT TCAACCTGAT CCCCTCGGTG
ATCGTGATCG CGGTGATCTA CATCGCGATC AACGTGGCGC TCGGCTACCT GGCGACCTGG
CTCGAACGGC GGAGCCGGCG CAGCACCCGG ACCGCGGCCA AGCCGGTCAC CACCGTGGTT
CAAGGCGAGG CGGCGATGAC CGGGTGA
 
Protein sequence
MSRATVLYDV PGPKARLRNN VLTFAFGVLF LFVAYFIWLK FDEKGQWEPD LWRPFLQADT 
WTELILPGLW NTLAAALVAA VLALAFGTVF GIARLSDHWW IRIPAGAIAE FFRAVPVLMM
IFFAQYGGSL LGLVVSEFAA VVFGLTVYNG SVLAEIVRAG IRAVPRGESE AGYAMGLRKN
QVMRLILLPQ AITSMMPAIV SQLVVLLKDT ALGFIVAYAD LLNAGARVVP ANYFNLIPSV
IVIAVIYIAI NVALGYLATW LERRSRRSTR TAAKPVTTVV QGEAAMTG