| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2585 |
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| Symbol | |
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| ID | 3672561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2660755 |
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| End bp | 2662194 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637711291 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_316343 |
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| Protein GI | 74318603 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.112747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCAGA CGTCCATATT GCGGTTCGGC CTCATGCTTG CCGCAGCCTT GGTGCTGCTG
ACGGGCGCGG CGACGTTCGC GCTTTATCAG CTGCGCGAAC CCGAGCATTC GACGTCCGAG
GAGCTCGGCA AGCCGGTCAT GGCGGCGCAG ATCGAGTTTC TCGCCGACGC CATGCAGCGC
AGCGCGGCCA GCATCGCCGC GCATCCGCAG ACGCTCGCCT GCTTCACCGC GCTTGCGGCC
GAGGTCTGCC AGACGCAAGC CGCCAACCTC CATGCCCTGA ACCCGAACGC CACCGTGCTG
TTCGTCACCG ACGGTCAGCG TCAGCTGCTG CCGGGCTTCC TGCCCGGCGA AACCCGGCGT
TTGCTCGCCA CCGCGGGCAA GGGCGCGATG GCCACAGCGA CGTTCAATCT CTCGCTTTCG
CACGAGGTCA GGGACGCGAA CGACAAGCGC CTGGGCTTTG TGATCGTCGA GCAGAGCGTT
CCCCAACTGC AGGCCTTGTT CGATACGCTG CCGCTGCCAG ACGCCGCGGC CTACGCGGAA
CTGCAGCAGA ACCAGGGCGG CGGCGCGACG GCGGTATTGA TGCGCCGGGG CAACCAGGCG
ATCAAGCTCA ACGCCCGGCC GACGCTGATC GCGCTCGCCG GTACGCCCTG GCTGATCGCG
GTGTGGCGTC CGCAGACGCC GATCGTCGAG AACGTCATGC CCTACGTGCT CGGCTGGCTC
GTCGCGAGCC TCGCCGTTGC CGTGCTGGTC GTCGCGACGA CGCTCGCGAT CCGCAATCGC
GTCGTCGACA ACCTGCGGAT CCTCGTCAAG TTCACCAACG ACCTTCGACA GCAACGCCTG
CGCGGCGATT ACCAGGCGAG CCTCGGCGAA TTCCAGATGC CGCTCGAGAC CATGCTGAAG
CTCGGCAGGG TGATGCTGGG ACGGCAGAAG GAGGTGTCGT CGCAGGCCCG GCTCGACCAT
TTGTCGCAGG TCAACAACCG GCGCAGCTTC GACGAGAAGC AGAAGGAGCT GTTCGCGACG
CTGAAGGACG GCTGGACGCA CAGCCTTCTG ATCCTCGACA TCGACAATTT CAAGCAGGTC
AACGACACCT TCGGTCACGA GGCCGGCGAC CAGCTCATCA TCAAGTTCGG CAACGCGCTG
AAGTCCTGCC TGCGCAACAG CGACTTCATC GCGCGCCTCG GCGGCGACGA GTTCTGCGTG
ATCTTTCCCT ACACGCCGCT CGACCGCGCC CGCGAGCTGG CCGAGCGCCT GCGCGCGAAC
ATGCCCGAAA GCGTCGAACT GATACCGGGC GTGACGCAGA AACTCTCATG GAGCGGGGGA
CTTTCCGAAT ACAGCCGTGA TGACGGGGGC GAGAATGAGG CGCTCGCGCG CGCCGACGCG
GCCTTGCTCG AAGCCAAGCG CGGCGGCCGC AACGCGACCC GCGTCAGGGC GAGCGCCTGA
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| Protein sequence | MLQTSILRFG LMLAAALVLL TGAATFALYQ LREPEHSTSE ELGKPVMAAQ IEFLADAMQR
SAASIAAHPQ TLACFTALAA EVCQTQAANL HALNPNATVL FVTDGQRQLL PGFLPGETRR
LLATAGKGAM ATATFNLSLS HEVRDANDKR LGFVIVEQSV PQLQALFDTL PLPDAAAYAE
LQQNQGGGAT AVLMRRGNQA IKLNARPTLI ALAGTPWLIA VWRPQTPIVE NVMPYVLGWL
VASLAVAVLV VATTLAIRNR VVDNLRILVK FTNDLRQQRL RGDYQASLGE FQMPLETMLK
LGRVMLGRQK EVSSQARLDH LSQVNNRRSF DEKQKELFAT LKDGWTHSLL ILDIDNFKQV
NDTFGHEAGD QLIIKFGNAL KSCLRNSDFI ARLGGDEFCV IFPYTPLDRA RELAERLRAN
MPESVELIPG VTQKLSWSGG LSEYSRDDGG ENEALARADA ALLEAKRGGR NATRVRASA
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