Gene Tbd_2494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2494 
Symbol 
ID3671813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2567450 
End bp2568313 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content73% 
IMG OID637711200 
Productmodification methylase HemK 
Protein accessionYP_316252 
Protein GI74318512 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.977942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGGC ACGCGGCCAC CGTCGCTGGC CTGCTCGACG TCGCGACCGA CCGAGTCGGC 
CGCGCGCTCG GGCTCGACAA GCGCGAAGCC CGGCTCGAAG CCCGCGTGCT CGCCGCCCAC
GCCTGGCAGG TGACGCCGGC CTGGCTCATC GCGCACGACA CCGATGTGGC GACGGCGCCG
CAAACCGCCG CCTTCGACGC GCTGCTCGCC CGGCGCCTGG GCGGCGAACC GATCGCCTAC
ATCGTCGGCG CGCGCGAGTT CTACGGGCGC AGGTTCGAAG TATCGCCCGC GGTATTGATT
CCACGGCCGG AGACCGAACT CCTCGTCGAG TTGGCGCTCG CACGGATCCC GCCCGACGAG
ACGACCACGG TGCTCGACCT CGGCACCGGC AGCGGCTGCA TCGCGATCAC GCTGGCGCTG
GAGCGCTCGC GGGCGCGCGT GACCGCGGTC GAGCGCTCGC CAGCTGCGCT GGCGCTCGCC
CGCCGCAACG CGCAAACGCT CGGCGCCAGC GTCGAATTTT CGGCCGGCGA CTGGTTCAGC
GACCTGACGG GGCGCAGCTA CGACCTCATC GTCGCGAACC CGCCCTACAT CGCCGACGCC
GACCCGCATC TCGCCCGAGG CGACCTGCGC CACGAACCGG TCGCCGCGCT GGCCTCTGGT
GCGGATGGAC TCGACGAGCT GCGGCGGCTG ATCGACGGGG CGCGCGACCA CCTGCGGCGC
CCTGGAATGC TGTTGCTGGA GCACGGCTAC GACCAGGCCG ACGCGGTGCA TGCGCTGCTT
CGCAGCGGCG GCTTCGCCCG CCCGCGCTGC TGGCATGACC TCGCCGGCAA CCCGCGCGTG
AGCGGCGCGG AATTGTCGAA ATAA
 
Protein sequence
MTGHAATVAG LLDVATDRVG RALGLDKREA RLEARVLAAH AWQVTPAWLI AHDTDVATAP 
QTAAFDALLA RRLGGEPIAY IVGAREFYGR RFEVSPAVLI PRPETELLVE LALARIPPDE
TTTVLDLGTG SGCIAITLAL ERSRARVTAV ERSPAALALA RRNAQTLGAS VEFSAGDWFS
DLTGRSYDLI VANPPYIADA DPHLARGDLR HEPVAALASG ADGLDELRRL IDGARDHLRR
PGMLLLEHGY DQADAVHALL RSGGFARPRC WHDLAGNPRV SGAELSK