| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2477 |
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| Symbol | |
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| ID | 3671796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2552614 |
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| End bp | 2554575 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637711183 |
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| Product | putative glutamate synthase (NADPH) small subunit |
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| Protein accession | YP_316235 |
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| Protein GI | 74318495 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTCA CGACGAACAA AGCAGCAAAG ACCGAAGGCA TGACGTGGCG TCGCTACAAG
GATGGCGAGT CGGAAGCGAA CATCCGTTCG GCTCAGGACC GCATTTTCCA GTCGAGCTGG
ACGCACAAGT GCCCAGAGTA CATGCTCTCC ACGCCGCCTT GCCAGGGTTC CTGCCCGGCC
GGTGAAGACA TCCGCGGTTA CCTCAACATC GTGCGCGGCA TCGAGAAGCC GCCAGCAGGC
GTGACCTGGC AGGAGTATGC CTTCCGCCGC GTGACCGAAG CCAACCCCTT CCCGGGCGTG
ATGGGCCGCG TGTGTCCCGC TCCGTGTGAA TCGGGCTGTA ACCGTAACAT GGTCGAAGAC
CATGTCGGCA TCAACTCGGT CGAGCACTTC ATCGGCGACT GGGGCATCGA AAACAACATG
GCCTACACGT CGACCGCTGC CGAAACCGGC AAGAAGATCG CGATCATCGG CGCCGGCCCG
GCCGGTCTGG CGGCCGCCTA CCAGCTGCGC CTGCGTGGAC ACGGCGTGAC CATTTTCGAC
GAGCACGAAG AGCTCGGCGG CATGATGCGC TACGGCATCC CGGGCTTCCG CACGCCGCGT
GAAATGCTCG ACGCGGAAAT CAACCGCATC ATCGCGCTGG GCGTCGAGAC CCGCCTCAAG
ACGCGCGTCG GCTCGGATAT CAGCTTCGAT GAGCTCGACA AGAACTACGA CGCCATCTTC
ATGGCGATGG GCGCGCAAGC GGGTCGTCCG CTGCCCGTTC CCGGCGCCGA AGCGCCGAAC
TGCGTGACCG CCGTCGCGTT CCTGCGTGCC TTCAACGAAG GTCGTCTGCA GCACGTCGGC
AACCGCGTCG TCGTGATCGG TGGTGGCGAC ACCTCGATCG ACGTCGCGAC CGTTGCGCGC
CGCCTCGGCA ATGTCACAAA GTCTGGCACC CATGATGACC GTCCCGAAGC CGTGATCGCG
GGCCACATGG CTTCCGACGT CGCGTCGATT TCCGCCCGCG AGGGTGCCGA AGTGGTGCTC
GTGTCGCGTG CCACGGTCGA CAAGATGGCC GCCAACAAGC ATGAAGTCGA GCACGCCCAG
CAGGAAGGCA TCGAAATCAT CGGCGGCGTG ACCCCGGTCT CCGTCGTCGT CGACGCCAAT
GGCCGTGCGA CCGCACTGCG CGTCGCCGAC TTCGTGATGG AAGGCAAGGA AACCAAGATC
GTCGAAGGCA CCGAGCGTGA TCTGCCGGCC GACCTGATCG TGTCTGCGAT CGGCCAAGGC
GTCGACTTCA CCGGCCTCGA GCAGTTCAAC AACAACAATG GCCTGATCAA GGCCGACAAG
AACTACCGCT TCCCCAACAA CGAGAAGGTC TTCGTCGGTG GCGACGTGAT CCGTCCGCAC
CTGCTGACGA CCGCGATCGG CCACGCCTCG ATCGCCGTCG ACGGCATCGA CGCCTTCCTC
GCAGGCAAGG AGCTCGACAA GCGTCCCAAG GTCGACGTTC ACCACTTCGA CGAAATCCGC
AAGTGGCTCG AATCCGGCCA CGAGTACAGC GAGGTCAAGG GTCAGATCTG GGGCACGTCC
GAGCGCAAGG ACATCCTGCA CAACTTCGAG GACCGTTCGC AGCGTCACGT CATTCCGCAC
AACGAGCTGT TCCTCGGCCA CTTCCCCAAC GAAGCGCGCC ACATCCGTGA AGTGACGGTG
CTCGACAAGG AAGGTGCGCT CGGCAACTTC GAAGAGCGTC TGCACGCGCT GTCGGAGAAG
GACGTGGTCG CCGAGGCCAA GCGCTGCATG TCCTGCGGCC AGTGCTTCGA ATGCGACAAC
TGCGTGGTGT ACTGCCCGCA GACGGCCGTG TTCAAGGTCA AGAAGAAGGA CAACCCGACC
GTGGGCCGTT ACGTCGATAC CGACTACGGC AAGTGCATCG GCTGCCACAT CTGTGCCGAC
GTCTGCCCGA CCGGCTACAT CGTCATGGGG ATGGGTGACT GA
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| Protein sequence | MAVTTNKAAK TEGMTWRRYK DGESEANIRS AQDRIFQSSW THKCPEYMLS TPPCQGSCPA
GEDIRGYLNI VRGIEKPPAG VTWQEYAFRR VTEANPFPGV MGRVCPAPCE SGCNRNMVED
HVGINSVEHF IGDWGIENNM AYTSTAAETG KKIAIIGAGP AGLAAAYQLR LRGHGVTIFD
EHEELGGMMR YGIPGFRTPR EMLDAEINRI IALGVETRLK TRVGSDISFD ELDKNYDAIF
MAMGAQAGRP LPVPGAEAPN CVTAVAFLRA FNEGRLQHVG NRVVVIGGGD TSIDVATVAR
RLGNVTKSGT HDDRPEAVIA GHMASDVASI SAREGAEVVL VSRATVDKMA ANKHEVEHAQ
QEGIEIIGGV TPVSVVVDAN GRATALRVAD FVMEGKETKI VEGTERDLPA DLIVSAIGQG
VDFTGLEQFN NNNGLIKADK NYRFPNNEKV FVGGDVIRPH LLTTAIGHAS IAVDGIDAFL
AGKELDKRPK VDVHHFDEIR KWLESGHEYS EVKGQIWGTS ERKDILHNFE DRSQRHVIPH
NELFLGHFPN EARHIREVTV LDKEGALGNF EERLHALSEK DVVAEAKRCM SCGQCFECDN
CVVYCPQTAV FKVKKKDNPT VGRYVDTDYG KCIGCHICAD VCPTGYIVMG MGD
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