Gene Tbd_2436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2436 
Symbol 
ID3673946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2506609 
End bp2507235 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content68% 
IMG OID637711142 
Product3-methyladenine DNA glycosylase II 
Protein accessionYP_316194 
Protein GI74318454 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.811433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC GTCCCCCCGA CTACTGGCAC GCCGCCTGCA GTGAACTCAC CGCGGCCGAC 
CCCGTCATGG CCGGGCTCAT CGCGCGCTAT CCCGACTGCG TGCTCGGCAA CCGCGGCGAC
CCGTTCCAGA CCCTCGCGCG CGCAATCGTC GGCCAGCAGA TCTCGGTCAA GGCCGCCGAC
AGCATCTGGG CCCGTTTCGC TGCGCTGATG GAAGCGGTGG CGCCTGCCCG GCTCGTCGCA
CTCGATCGCG ACACGCTCGC GACCTGCGGG CTGTCGCGAC GCAAGGTCGA ATATCTCGTC
GACCTCGCCG GGCATTTCAT CGACGGCCGC GTCGAGCCTT CGCGCTGGAA GCGCATGGAC
GACGAGGACG TCATCGCCGA GCTCGTCGAC GTGCGCGGCA TCGGCCGCTG GACCGCGGAG
ATGTTCCTGA TCTTCAATCT GCAGCGCCCC GACGTCTGGC CGGTCGACGA CATCGGTCTG
CAGAAGGCCG TCGCGCTGCA TTATCTCGAA GGCGTTCGGC CGACGCCGAA GGTCTTGCGC
GCGCACGGCG AACGCCACGC GCCGTGGCGG ACGGTCGCGA CCTGGTATTT ATGGCGCAGC
CTGGACCCTG CGGTCGTGCA GTATTAG
 
Protein sequence
MTARPPDYWH AACSELTAAD PVMAGLIARY PDCVLGNRGD PFQTLARAIV GQQISVKAAD 
SIWARFAALM EAVAPARLVA LDRDTLATCG LSRRKVEYLV DLAGHFIDGR VEPSRWKRMD
DEDVIAELVD VRGIGRWTAE MFLIFNLQRP DVWPVDDIGL QKAVALHYLE GVRPTPKVLR
AHGERHAPWR TVATWYLWRS LDPAVVQY