| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2369 |
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| Symbol | |
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| ID | 3671862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2442789 |
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| End bp | 2444012 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637711074 |
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| Product | type IV pilus assembly protein PilC |
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| Protein accession | YP_316127 |
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| Protein GI | 74318387 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.529559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.133381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACAG CGGCAAAGGC AGTCAAGGAC GCGACCTTCC TGTGGGAAGG CATGGACAAG
CGCGGCAAGA AGGTCAAGGG TCAGATCCAG GCCGCCGGCG AAACGCTTGT CAACGCGCAG
CTACGCAAGC AGGGGATCCG GGTCACGAAG CTCAAGAAGC AGAGCAATCT TTTCGGCGGC
GGCAAGCGCA TCACCGAAAA GGATGTCGCG CTCTTCACGC GGCAGCTCGC GACCATGATG
AAGGCCGGCG TGCCCTTGCT GCAGTCGTTC GAAATCGTGG CCCGCGGGCA CTCCAACCCG
TCAATGCAGC GGCTGCTCAT GGAGATCAAG GCCGACATCG AGAAGGGCAG CAGCCTCACG
CAGTCGTTTG CACGGCACCC GCTCTATTTC GACGCACTCT TCTGCAACCT CGTCGGGGCC
GGCGAGGCGG CCGGTATCCT CGAGGCGGTG CTCGACCGGC TCGCGGTCTA CAAGGAAAAG
ATCCTCGCGA TCAAGGGCAA GATCAAGTCG GCGCTGTTCT ACCCGGTGTC GATCATCGTG
GTCGCCTTCG TCATCACGGC GATCATCATG ATTTTCGTCA TCCCCGCCTT CAAGGAGCTA
TTCAGCAGCT TCGGGACGGA CCTGCCGGGA CCGACCCTGG TCGTGATGGC GATTTCGGAC
TTTTTCGTCA CGTGGTGGTG GGCGATTTTC GGCGGAATAG GCGGCGGCAT CTACGCGTTT
CTGCAGGCGT GGAAGCGCTC GCGCAAGATC CAGATAGCCA TGGACCGATT CTTGCTAAAG
TTGCCCATTT TCGGCGCGGT CATTGAAAAA GCGACGATCG CGCGCTGGAC GCGCACGCTA
TCGACCATGT TCGCGGCAGG CGTACCGCTG GTCGAGGCAC TCGAATCGGT TGCCGGCGCG
TCGGGCAATC AGGTCTTCGT CGAGGCGACG CAGAAGATCC GCGGTGAGGT TGCGACCGGG
ACGGCCCTGA CCGTCGCGAT GCAGAACTCG GGGCGCTTTC CGAATATGGT GCTGCAGATG
GCGGCGATCG GCGAGGAGTC GGGCTCGCTC GACGCGATGC TCGGCAAGGT CGCCGATTTT
TACGAGTCTG AAGTCGATGA CGCCGTCGAG GCGCTGTCGA GCCTGATGGA GCCCCTCATC
ATGGTCGTGT TGGGCACGCT GATCGGTGGG ATGGTCATCG CGATGTACCT GCCGATCTTC
AAGATGGGCG CGGTCGTCGG ATGA
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| Protein sequence | MATAAKAVKD ATFLWEGMDK RGKKVKGQIQ AAGETLVNAQ LRKQGIRVTK LKKQSNLFGG
GKRITEKDVA LFTRQLATMM KAGVPLLQSF EIVARGHSNP SMQRLLMEIK ADIEKGSSLT
QSFARHPLYF DALFCNLVGA GEAAGILEAV LDRLAVYKEK ILAIKGKIKS ALFYPVSIIV
VAFVITAIIM IFVIPAFKEL FSSFGTDLPG PTLVVMAISD FFVTWWWAIF GGIGGGIYAF
LQAWKRSRKI QIAMDRFLLK LPIFGAVIEK ATIARWTRTL STMFAAGVPL VEALESVAGA
SGNQVFVEAT QKIRGEVATG TALTVAMQNS GRFPNMVLQM AAIGEESGSL DAMLGKVADF
YESEVDDAVE ALSSLMEPLI MVVLGTLIGG MVIAMYLPIF KMGAVVG
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