Gene Tbd_2163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2163 
Symbol 
ID3671944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2248368 
End bp2248991 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content67% 
IMG OID637710867 
Productputative ubiquinone biosynthesis monooxygenase Coq7 
Protein accessionYP_315921 
Protein GI74318181 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2941] Ubiquinone biosynthesis protein COQ7 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0397519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAC TCGACCAACT GATCAGCACC TTCGATCTGG GTCTGCGCAC GGTTTTCGCG 
ACGCCGCACG CGGGCCGCCC CTATCCGGGC AGTCCGCAGG AGGCGGAGCT GAGCGAAACC
GAGCGCGCGC ACGCCGCCGC GCTCATGCGC GTCAACCACG TCGGCGAGGT CTGCGCGCAG
GCGCTCTACG CCGGCCAGGC GTTGACCGCG AAGAACGCGC AGGTGCGCAG CGAACTCGAA
CGCGCCGCGC GCGAGGAAAC CGACCACCTG GCGTGGTGTG AGCAGCGCAT CGACGAACTC
GGCGGCCGCA AGAGCCTGCT CAATCCGCTC TGGTTCGGCG GGGCGTTCGG CATCGGCGTC
GTCGCCGGCC TGCTCGGCGA CAAATGGAAT CTCGGCTTTC TCGCCGAAAC CGAGCGTCAG
GTCGAAGCGC ATCTCGACGG CCATCTGCAA AAACTCCCCG AGGCCGATGC CAAAAGCCGC
GCCGTGGTCG AGCAGATGAA GCTCGACGAA GCGCAGCACG CGCAAATCGC GATCGCCCAC
GGTGGCGCGT CACTGCCGCC GCCAGTGAAA TGGGCAATGC GCTTCGCTGC GGATGTGATG
CGGCAGACAG CCAGCCGGAT CTAG
 
Protein sequence
MNRLDQLIST FDLGLRTVFA TPHAGRPYPG SPQEAELSET ERAHAAALMR VNHVGEVCAQ 
ALYAGQALTA KNAQVRSELE RAAREETDHL AWCEQRIDEL GGRKSLLNPL WFGGAFGIGV
VAGLLGDKWN LGFLAETERQ VEAHLDGHLQ KLPEADAKSR AVVEQMKLDE AQHAQIAIAH
GGASLPPPVK WAMRFAADVM RQTASRI