| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2151 |
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| Symbol | |
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| ID | 3671932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2237613 |
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| End bp | 2239007 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637710855 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_315909 |
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| Protein GI | 74318169 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.146261 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAGA TCCTCGTACC GCTGATGTTC GTCGGGCTCG TCGCCTTTCT GCTGATCGGC
TATCCGGTCG CGTTCGCGCT CGCGGCGAAC GGTCTGCTCT TCGCCGCGAT CGGCATCGCC
GCCGGCCTCT TCGACCTGTC GCTGCTGCAC GCCTTGCCTG AGCGCGTCTA CGGCATCGTC
GCCAATCCGA CGCTGCTCGC GATACCGTTC TTCGCCCTGA TGGGGTTGAT CCTTGAGCGC
TCGGGCATGG CCGAGGACCT GCTCGATACG GTCGGCCAGC TGTTCGGCTC GGCGCGCGGC
GGCCTCGCCT ACGCGGTGGT CCTGGTCGGC GGCCTGCTCG CCGCGACGAC CGGCGTCGTC
GCCGCGACCG TGATCGCGAT GGGGCTGATC TCGCTGCCCG TGATGCTGCG CTACGGCTAC
GACAAACGGC TCGCCGCGGG CGTCATCGCG GCGTCGGGCA CGCTCGCGCA AATCATTCCG
CCATCGCTGG TCCTGATCGT GCTGGCCGAC CAGCTCGGGA CTTCGGTCGG CGCCATGTAC
AAAGGTGCGC TGGTCCCGGG GCTCGTCCTC GTCGCGGCCT ATCTGGCCTA CGTGTTCGGC
GTGAGCCTGC TGCGCCCGCA CGCCGCCCCC GCAGTGCCGA CGTCGGCGCG TACGCTGCGC
GGATCGGCGC TCGCGCTGCG CGTGCTCACC ACGCTGCTGC CGCCGCTGGT GCTCATCTTC
CTCGTGCTCG GCACGATTTT TCTCGGCGTC GCGACGCCGA CCGAAGGCGG CGCGATGGGT
GCGGTCGGCG CGCTCGCCCT CGCCGCGGCG CGCGGACGCC TGACGCGGCT GCAGCTCACC
CAAGCCGTCG ACAGCACCAC CCGGCTCACG ACCTTCGTCA TCTTCATCCT GATCGGCTCG
ACGATATTCA CGCTCGTTTT CCGCGGGCTC GACGGCGACG CCGCGGTCGA GCACGTCTTC
GCCCAGCTGC CCGGCGGCGT CCTCGGCTTT CTCATCGTCG TCAACCTGCT GGTGTTCGTG
CTCGCGTTCT TTCTCGACTT TTTCGAGATC GCCTTCATCG TCGTCCCGCT CGTCGGCCCG
GTCGCCGCCA AGCTCGGCAT CGACCCGATC TGGTTCGGTG TCATGCTCGC GGTCAACATG
CAGACCGCGT TCATGCATCC GCCCTTCGGC TTCGCGCTGT TCTACCTCAA GAGCGTCGCG
CCGAAGGCGG TCCGCACCGG CGACATCTAC CGCGGCGCGA TTCCGTTTCT CGTCATCCAG
CTCCTGATGG TCGCCGTCGT CCTGGGTTTC CCGCAGATCG TCCTGCGCGA CGTGGCGGGC
GACGCGAGCA GCGTGCGCGA GATCCCGATC GACGTCGACC CCGACGCCAA CTATCTCCCC
GCCGAGTGGC GCTGA
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| Protein sequence | MTEILVPLMF VGLVAFLLIG YPVAFALAAN GLLFAAIGIA AGLFDLSLLH ALPERVYGIV
ANPTLLAIPF FALMGLILER SGMAEDLLDT VGQLFGSARG GLAYAVVLVG GLLAATTGVV
AATVIAMGLI SLPVMLRYGY DKRLAAGVIA ASGTLAQIIP PSLVLIVLAD QLGTSVGAMY
KGALVPGLVL VAAYLAYVFG VSLLRPHAAP AVPTSARTLR GSALALRVLT TLLPPLVLIF
LVLGTIFLGV ATPTEGGAMG AVGALALAAA RGRLTRLQLT QAVDSTTRLT TFVIFILIGS
TIFTLVFRGL DGDAAVEHVF AQLPGGVLGF LIVVNLLVFV LAFFLDFFEI AFIVVPLVGP
VAAKLGIDPI WFGVMLAVNM QTAFMHPPFG FALFYLKSVA PKAVRTGDIY RGAIPFLVIQ
LLMVAVVLGF PQIVLRDVAG DASSVREIPI DVDPDANYLP AEWR
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