Gene Tbd_2052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2052 
Symbol 
ID3672223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand+ 
Start bp2139898 
End bp2140539 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content64% 
IMG OID637710754 
Productdeoxynucleoside kinase 
Protein accessionYP_315810 
Protein GI74318070 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1428] Deoxynucleoside kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.945142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.171237 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCAT CCCGCTACCG TTACATCGTC GTCGAAGGCC CGATCGGCGC CGGCAAGACC 
AGTCTCACGC ACAAGCTGGC CGAACGTCTC GGCGCCGACC TGCTGCTCGA GAACGCGGGC 
GACAACCCTT TCCTGCCGCG CTTCTATCAG GAACCGCGCC GTTACGCGCT GCCGACGCAG 
CTGCATTTCC TGTTCGACCG CTCGCGCCAG TTGCGTGATC TTGGCCAGGG CGACCTGTTC 
CGCAGCGGAA CGGTGTCGGA CTTCCTGATC GACAAGGACA TGCTGTTCGC GCGCCTGAAT 
CTCGACGACG ACGAGTTCGA GCTCTACCAG AAGGTCTACG CCGACCTCGC GCCGCAGGCG 
GCGACGCCCG ATCTCGTGAT CTACCTGCAG GCGCCGACGG AGACGCTGCA CGAGCGCGTC 
CGTCGCCGCG GGATCGATTT CGAGCGCGGC ATGGACGCGG CGTATCTGGA GCGGCTCGCC 
AACAGCTACA GCGAATTCTT CCATCGCTAC GACGCGGCGC CGCTTCTGAT CGTCAACACC 
AGCCACCTCA ACTTCGCGCA GAACGAGGCC GATTTCGAGC TGCTGCTCGA ACGCATGAAC 
AAGATGCGCG GACCGCGCGA GTTCTTCAGC CGGGCCGCGT GA
 
Protein sequence
MTSSRYRYIV VEGPIGAGKT SLTHKLAERL GADLLLENAG DNPFLPRFYQ EPRRYALPTQ 
LHFLFDRSRQ LRDLGQGDLF RSGTVSDFLI DKDMLFARLN LDDDEFELYQ KVYADLAPQA 
ATPDLVIYLQ APTETLHERV RRRGIDFERG MDAAYLERLA NSYSEFFHRY DAAPLLIVNT 
SHLNFAQNEA DFELLLERMN KMRGPREFFS RAA