| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2008 |
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| Symbol | |
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| ID | 3672179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2094965 |
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| End bp | 2098792 |
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| Gene Length | 3828 bp |
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| Protein Length | 1275 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637710710 |
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| Product | ATP-dependent helicase HrpA |
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| Protein accession | YP_315766 |
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| Protein GI | 74318026 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01967] ATP-dependent helicase HrpA |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCAA GTATCTCCGC GACAAATAAA CCCGCCGGCA CGTCGCCCGG CCTGCGGATC
ACCTACCCTG ACCTGCCCGT CGCCGCGCGG CGCGACGACA TCCTCGCCGC GCTCGAGCGC
CACCGCGTGC TGATCCTCTG CGGCGAAACC GGCTCGGGCA AGACGACGCA GATTCCCAAG
ATGTGCCTCG AGGCGGGTAT TCCGCCCGGC AAGCTGATCG GCTGCACCCA GCCGCGGCGC
ATCGCCGCGC GCTCGGTCGC GGCGCGCATC GCCCAGGAAC TCGGCAGCGA ACTCGGCGGG
CTGGTCGGCT ACAAGGTGCG TTTCAGCGAC AAGGTGCGTC CGGATACCGC AATCAAGGTC
ATGACCGACG GCATCCTGCT CGCGGAAAGC CAGGGCGACC CACTGCTCTC GCGCTACGAC
ACGATCATCC TCGACGAGGC GCACGAGCGC AGCCTCAACA TCGACTTTCT GCTCGGCTAC
CTCAAGACCC TGCTCGACAA GCGCGCCGAT CTGCGCGTAC TCGTCACCTC GGCGACGATC
GACGCCGAAC GCTTCTCGAA GCACTTCGAC GACGCGCCTG TGATCGAAGT GTCGGGACGG
CTCTATCCGG TCGAAATCCG CTGGCGTCCG ATCGCGCGCG ACGACGAGGC GGGCGCGCCC
GGGAACAAGC GCGAGGCGGA AAAGCCCGGC CGGACGTACA AGGACGGCCC CGACCAGATC
GCCGCCATCC TCGACGCGAC CGACGAACTG GCGCGGCTCG GGCCCGGCGA CATCCTCGTT
TTCCTGCCGG GTGAGCGCGA AATCCGCGAC ACCGCCGAGG CGCTGCGTAA GCATCACCCG
CCCGGAACCG AAATCCTGCC GCTGTTCTCG CGCCTGTCGG TCGCCGAACA GGACGCGATC
TTCAAGCCGA CGTCGGCGCT GCGGCGCATC GTGCTCGCGA CCAACGTCGC CGAAACCTCG
CTGACCGTTC CCGGCATCCG CTATGTGATC GACCCCGGCA CGGCGCGAGT CAAGCGCTAT
TCGGCGCGCA ACAAGGTCGA GCAGCTATTG ATCGAGAAGG TGTCGCAGGC GTCGGCCAAC
CAGCGCGCGG GACGCTGCGG CCGCGTCGCC GACGGGGTGT GCATCCGGCT TTACGACGAG
GCGGATTTTT CTAACCGGCC ACGCTTCACC GACCCCGAAC TGCTGCGTTC CTCGCTCGCC
GGCGTCATCC TGCGCATGAA GTCGCTCGGC CTCGGCGACG TCGTCGGCTT TCCCTTCATC
GACCCGCCGA GCAGCCGGCT CGTGACCGAC GGCTATCAAT TGCTCGGCGA GCTTCACGCA
CTCGACGAGC AGGGGCAATT GACGAAGATC GGCCGGCAGC TCGCGAAGCT GCCGCTCGAC
CCGCGCATCG CGCGCATGCT GCTGGCCGCC GAGCAGCAGC GCTGCGTGCG CGAAATCCTG
ATCATCGCGA GCGCGCTCTC GGTGCAGGAC CCGCGCGACC GCCCGATGGA GCGCGCGCAG
GCGGCCGACG AGAAGCACAA GCTTTTCCAG GACGAGCGTT CCGACTTCAT GGGCTGGCTC
AGGCTGTGGC GCTGGTACGA GGAGCAGGTG CAGCACAAGA AGACCAACCG CCAGCTGCAG
ACGCTGTTGC AGGATCATTT CCTGTCGCCA CGGCGCATGC GTGAGTGGCG CGACATCCAT
GGGCAGTTGC ACGCGCAGGT CGCCGAGCTG GGGCTGCGCG AGAACGAGAA GGACGCCGGC
TACGACGCGA TCCATCAGGC GCTGCTGAGC GGCCTGCTCG GCAATATCGG TTTCAAATCC
GACGACGGCC GCGCAAAGAC CGGCGCGGGG CGGCCGAAGC CCGGTGAAGG CAACTACCTG
GGCGCCCGCG GCATCAAGCT CTCGATCCAC CCCGGCTCGG CGCTGGCGAA GAAGGGCCCG
AAATGGATCA TGGCCGCCGA GCTCACCGAC ACCGGCCGCC TGCTCGCGCG CACCGTCGCC
GAGGTCCGTC CCGAGTGGAT CGAGGGCGCG GGCCGCCACC TGCTCACGCG CATGTACATC
GAGCCGCACT GGGAGAAGGA CGGCGCGCGC GTCGTCGCCT GGGAGCGCGT GAGCCTCTAC
GGCATCACGC TCGTGCCGCG GCGCAAGATC CACTACGGCC CGATCGATCC CGAGCTTGCG
CGTGAACTCT TCATCCGCGG TGCGCTTGTC GCCGGCGATT ACGACACGCG CGCGCCGTGG
TTCGCACACA ACCGCGCGCT GATCCAGGAA ATCGAGGACC TCGAGCACAA GGCCAGAAAA
TCCGGTGTCT GGCTCGACGA GGCCCGCATT TACGGCATCT TCGACGCGCG CGTTCCGGCC
GGCATCCACA ATGGCGTGGC GTTCGAGAAG TGGCGGGCCG AGGCGGAGGC CGCCGACCCC
CGCACCCTGT TTCTGCGCCG CGAGGACATC CTCGGCGAGG GGCTCGGCGC CGATCACACG
CTCTTCCCGG AGTCGATGCA GGTCGATGGC GTGATGTGCG CGCTCAAATA CCGCTTCGAG
CCGGGTCACC CGCTCGACGG CGTCACGCTG CGCGTGCCGC TGTATCTGCT CAACCGGATC
GAAGCGCCGC AGATCGACTG GCTCGTTCCC GGCCTGATCC GCGAGAAATT GACCGCGCTG
CTCAAGTTCC TGCCCAAGGA CAAGCGCCGG CCGCTGATTC CACTGCCCGA TACGGTCACG
GCGTTTCTGT CGAGCGCGCA GCCCGGCGAG CGGGTGCTGA CCGAGGCGCT GGCCGCCTTC
GTTCGCAAAA AAACCGGCGC CGACATCCAT CCCGACGACT GGCGCGGCGA ATTGCCCGCC
CACCTCAAAA TGAACCTCTG CGTCGTCGAC GACAGCGGAC AGGAACTCGC GAGCGGCCGC
GACCTTGGCG CGCTGCGTCA GCAGCTCGGC GGCGCTGCGC GCATCACCTA CGGGGGCGGG
GCCGCCGACA GCGAGTTCGA GCGTACCGGG CTGCTCGAAT GGGATTTCGG CGACCTGCCG
GAGCAAGTCA AATTCAAGCG CGGCGGCCGC GAGCTGACCG GCTATCCCGC GCTCGTCGAC
ACCGGCACGA GCGTCGACCT GCGTCTCATC GACACGGCCG AGGCGGCGCG GGGCGAGACG
CGACGCGGCG TGATCCGCCT GCTGCGACTC GCGCTCGCCG CGCAGTTCAA GCAGCTCGAC
AAGGACCTTG GGCGCGAGAC GGCGCTCGCG TTGAAATTCC GCACGCTCGG CAGTCCCGAA
ACCCTGCGCG CGCACTTGCT CGACGCGATC GCCGCCCGCG CGCTGCTCGG CGACGACGAG
ACGCCGCGCG ACGCAAAGGC TTTCGCCAGG CAGAAGGAGC GCGCCAAGCC GCGTGTCGCC
GTCGTGAAGC AGGCCCTACT GCGCGACGTC GCGGAGATCC TCGACCTGCA CGCGCAGGTG
GCGGCGCGCC TCGCGGCCAA GCCGCAGTTC ACGGCGGTGA TGCGCGATGA GACGGCCCAC
CTCGCGGCGC TGGTTCCGTC CGATTTCATC ACCGCCACGC CGTGGCCGCG GCTGAAAGAC
CTGCCGCGGT ACCTGCGCGG CATCCTCAAG CGCTTGGAGA AGCTGCCGGC GGCCGAGCAG
CGCGACGCGC GCGCCATGGC CGGCGTGCTG ACGCTGCAGA ATAAATATCA GGCACGACGG
GCGCAGGTAC GCGGCGAGCT TCCCGCCGCG CTCGACGATT TCCGCTGGCA ACTCGAGGAA
CTGCGGGTCT CGCTGTTCGC GCAGGAGCTG AAGACGCCGT ACCCGGTCTC GGTCAAGCGG
CTCGACAAGG TCTGGGACAC GCTTGCCAGG CAGCCGCTCG ATCAGTAG
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| Protein sequence | MTSSISATNK PAGTSPGLRI TYPDLPVAAR RDDILAALER HRVLILCGET GSGKTTQIPK
MCLEAGIPPG KLIGCTQPRR IAARSVAARI AQELGSELGG LVGYKVRFSD KVRPDTAIKV
MTDGILLAES QGDPLLSRYD TIILDEAHER SLNIDFLLGY LKTLLDKRAD LRVLVTSATI
DAERFSKHFD DAPVIEVSGR LYPVEIRWRP IARDDEAGAP GNKREAEKPG RTYKDGPDQI
AAILDATDEL ARLGPGDILV FLPGEREIRD TAEALRKHHP PGTEILPLFS RLSVAEQDAI
FKPTSALRRI VLATNVAETS LTVPGIRYVI DPGTARVKRY SARNKVEQLL IEKVSQASAN
QRAGRCGRVA DGVCIRLYDE ADFSNRPRFT DPELLRSSLA GVILRMKSLG LGDVVGFPFI
DPPSSRLVTD GYQLLGELHA LDEQGQLTKI GRQLAKLPLD PRIARMLLAA EQQRCVREIL
IIASALSVQD PRDRPMERAQ AADEKHKLFQ DERSDFMGWL RLWRWYEEQV QHKKTNRQLQ
TLLQDHFLSP RRMREWRDIH GQLHAQVAEL GLRENEKDAG YDAIHQALLS GLLGNIGFKS
DDGRAKTGAG RPKPGEGNYL GARGIKLSIH PGSALAKKGP KWIMAAELTD TGRLLARTVA
EVRPEWIEGA GRHLLTRMYI EPHWEKDGAR VVAWERVSLY GITLVPRRKI HYGPIDPELA
RELFIRGALV AGDYDTRAPW FAHNRALIQE IEDLEHKARK SGVWLDEARI YGIFDARVPA
GIHNGVAFEK WRAEAEAADP RTLFLRREDI LGEGLGADHT LFPESMQVDG VMCALKYRFE
PGHPLDGVTL RVPLYLLNRI EAPQIDWLVP GLIREKLTAL LKFLPKDKRR PLIPLPDTVT
AFLSSAQPGE RVLTEALAAF VRKKTGADIH PDDWRGELPA HLKMNLCVVD DSGQELASGR
DLGALRQQLG GAARITYGGG AADSEFERTG LLEWDFGDLP EQVKFKRGGR ELTGYPALVD
TGTSVDLRLI DTAEAARGET RRGVIRLLRL ALAAQFKQLD KDLGRETALA LKFRTLGSPE
TLRAHLLDAI AARALLGDDE TPRDAKAFAR QKERAKPRVA VVKQALLRDV AEILDLHAQV
AARLAAKPQF TAVMRDETAH LAALVPSDFI TATPWPRLKD LPRYLRGILK RLEKLPAAEQ
RDARAMAGVL TLQNKYQARR AQVRGELPAA LDDFRWQLEE LRVSLFAQEL KTPYPVSVKR
LDKVWDTLAR QPLDQ
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