Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1964 |
Symbol | |
ID | 3671716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2056573 |
End bp | 2057115 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637710663 |
Product | hypothetical protein |
Protein accession | YP_315722 |
Protein GI | 74317982 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.939203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAACT CGTTTTGGGC TGCTGCCAGT GCAGTGGGCC TTGTTGTGCT TGGTTCCCTG TTTGTCCAGA CCGCCCAGGC TGCGGCACAG GTTTATACCT TTACGGCGTC CAACTTCACC TCGTATAACG GTACGCCCGT GCCCTATGCC GCCATTTCGG GTCATGTGAC GCTCGACGGC ACCAACGTCA CCGGTCTTAA TCTGACCATC GGGGATCGCA CTTATTCGCC CTCGGAGGTC GGTTACTTTG CACTGGATTA CCCTGCCGGG TCTTCGGGCG TCGTGGGCGC CTACAAGGCG ACAAGTTGGG ATGATGCACG CAGCGTGAGC ACGAACACGG ACGATTTCAT GTTGCAGGCT GACTTTGCCA ATCCGCAGAA TTTCGCAGGC TTCACTTACA GCGTCGCAGC TTTGAACGAT ATTTTCGATT CGACAAACGT CTCAATTTCC GTGTCGGCTG TGCCTGAACC CGACATATAC GCGATGCTGG CATCCGGACT TGGGATGCTG GTGGTGGCCG TGCGTCGCAA GCGGCGCGAA TAA
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Protein sequence | MKNSFWAAAS AVGLVVLGSL FVQTAQAAAQ VYTFTASNFT SYNGTPVPYA AISGHVTLDG TNVTGLNLTI GDRTYSPSEV GYFALDYPAG SSGVVGAYKA TSWDDARSVS TNTDDFMLQA DFANPQNFAG FTYSVAALND IFDSTNVSIS VSAVPEPDIY AMLASGLGML VVAVRRKRRE
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