| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1920 |
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| Symbol | |
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| ID | 3674030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2016826 |
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| End bp | 2017887 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637710619 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_315678 |
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| Protein GI | 74317938 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG CAGTTTTGCC GGGTGACGGC ATCGGTCCGG AAATCATCTC CCAGGCAGTC
AAGGTGCTGG AGGCGCTCAA GTCCGAAGGC GCGAAGATCG AGATGGAAAC CGCGCCGATC
GGCGGCGCCG GCTACGACGC GGCGGGCGAT CCGCTGCCGG AGGCGACGCT GAAACTCGCG
CGCGAAGCCG ACGCGGTGCT GCTCGGCGCC GTGGGGGGGC CGCAGTACGA CACGCTCGAT
CGCCCGCTGC GCCCGGAACG CGGCCTGCTG CGCATTCGCA AGGAACTGAA CCTCTTCGCC
AACCTGCGCC CGGCACTCTT GTATCCCGAA CTCGCGTCGG CGTCGTCGCT GAAGCCCGAG
GTCGTGTCCG GCCTCGATCT GATGATCGTG CGCGAACTGA CCGGCGATGT GTACTTCGGC
CAGCCGCGCG GCATCGAAAC ACGGAATGGC GAGCGCGTCG GCTTCAACAC CATGCTGTAT
TCGGAGTCCG AGGTGCGCCG CGTCGCCCAC GTCGCCTTCG GCATCGCGAT GAAGCGCGGG
AAGAAGCTCT GCTCGGTCGA AAAGGCCAAC GTGCTCGAAT GCTCGGAGCT GTGGAAGGAA
ATCATGATCG AGGTGGCCAA GGACTACCCC GAGGTCGAGC TTTCGCACAT GTACGTCGAC
AACGCCGCGA TGCAGCTCAT CCGCGCCCCC AAGCAGTTCG ACACCATCGT CACCGGCAAC
ATCTTTGGCG ACATCCTGTC CGACGCCGCC TCGATGCTGT CGGGATCGAT CGGCATGCTG
CCGTCGGCCT CGCTCGACGA ACACAACAAG GGCATGTACG AGCCGATCCA CGGCTCGGCG
CCCGACATCG CCGGGAAGAA CCTCGCCAAC CCGCTCGCGA CGATCCTGTC GGTCGCGATG
ATGTACCGCT ACACCTTCGC CGATCTGGCG ACTGCCGACC GCATCGAGAA CGCAGTCAAG
CAGGTGATCG CGAAGGGCTA TCGCACCGGC GACATCTGGA CCGAGGGTAC GCAGAAGGTG
TCGTGCAGCG AGATGGGCGA CGCGGTGGTC GTGGCACTTT GA
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| Protein sequence | MKIAVLPGDG IGPEIISQAV KVLEALKSEG AKIEMETAPI GGAGYDAAGD PLPEATLKLA
READAVLLGA VGGPQYDTLD RPLRPERGLL RIRKELNLFA NLRPALLYPE LASASSLKPE
VVSGLDLMIV RELTGDVYFG QPRGIETRNG ERVGFNTMLY SESEVRRVAH VAFGIAMKRG
KKLCSVEKAN VLECSELWKE IMIEVAKDYP EVELSHMYVD NAAMQLIRAP KQFDTIVTGN
IFGDILSDAA SMLSGSIGML PSASLDEHNK GMYEPIHGSA PDIAGKNLAN PLATILSVAM
MYRYTFADLA TADRIENAVK QVIAKGYRTG DIWTEGTQKV SCSEMGDAVV VAL
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