Gene Tbd_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1909 
Symbol 
ID3674019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2005655 
End bp2006146 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content67% 
IMG OID637710608 
Productcolicin V production protein 
Protein accessionYP_315667 
Protein GI74317927 
COG category[R] General function prediction only 
COG ID[COG1286] Uncharacterized membrane protein, required for colicin V production 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.485501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGC TCGACCTGAT CGTGGTGCTC GTGCTGCTGC TGGCCGTCGT GCGCGGCCTG 
ATGCGCGGTC TGGTCGACAC GCTGTTTTCG CTTGCCGCAT GGATACTCGC CTTCATCGCG
GGCAGATGGG GCGCGGTGGC GCTGGCGCCG ATGCTGCCGA TCGGGATCGA GAACCCGGCG
ATTCGTTATT TCGCGGGCTT CGCGGTCATC TTTCTGGTCG TCCTGATCGG CGTGCTGCTG
CTCGGCCATG CGCTCGCCTC GCTCGTCAAG GCGGCGGGCC TCGGCAGTGC CGACACCGTG
CTCGGCGGCG TGCTGGGTCT GGCGAAGGGC CTCGTCATCC TGGTCGGGCT CACGCTGGCG
GCGGGCCTCA CGTCGCTGCC GCGTACGGAC TTCTGGAAGC AGGCCATGCT CTCGGGCACC
CTGCAGTCGA TGGCGCAGAG CGCCCTGCCG CTGGTGCCGG CAAGCGTCGC GAAATACGTT
CGCTTTGAAT AA
 
Protein sequence
MSLLDLIVVL VLLLAVVRGL MRGLVDTLFS LAAWILAFIA GRWGAVALAP MLPIGIENPA 
IRYFAGFAVI FLVVLIGVLL LGHALASLVK AAGLGSADTV LGGVLGLAKG LVILVGLTLA
AGLTSLPRTD FWKQAMLSGT LQSMAQSALP LVPASVAKYV RFE