| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1886 |
|---|
| Symbol | |
|---|
| ID | 3673996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | - |
|---|
| Start bp | 1985170 |
|---|
| End bp | 1985898 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637710585 |
|---|
| Product | oxo-acyl acyl carrier protein dehydrogenase |
|---|
| Protein accession | YP_315644 |
|---|
| Protein GI | 74317904 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.602963 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACTCCGG CCATGGATAA GCCGCGCAAA ACGATCTTGC TATTTGGTGC TAGTGGCGCA
ATCGGATCCT CCATTGCGGA CTTATTCTTG TCTCGCGACT GGAGCGTAGT CGGCGTGACC
CGCAGTGTGC GCTCCGGTCA AGCCAATGGA GTGTCCTGGA TAATCGCTGA TCCGTTGGCC
GGTCACGTGG CAGCGGACGG TTATGATGAA TACGCTCCAT ACCATGCCGT GTGCTGGGCC
CAGGGAGGAA ACGTCAACGA TAGCGTCTAT GACGTAGATG TGGATGCGCA TTTACAGCTC
TATCAGACCA ACTGCATATA CATCCTGTCG TCGTTGAAGC TGCTTCTGCA GCGGAGCTTG
CTCGCCCAGC CTGCGAGGTT ATGCGTCATC AGTTCGATCT GGCAGGAGAT TGCGAGGCAA
AACAAGCTCT CCTATGGCAT GACGAAATCG GCACTGCGAG GGCTGGTGTT GTCGGCGGCG
GCGGACCTCG CGGCTGACGG CCATCTTGTT AACGCCATAC TTCCGGGGGC GCTGGACACG
CCAATGACTC GCGAAAATCT TACCGCTGAA CAGATAGGCG AATTGGCTAG CGCAACACAA
TTCGGTCGTC TTCCGCAGTT GGGAGATGTT TCCCGGCTCG CGATGTTTCT TTGCTCGGAA
GAGAATACGG GCATAACTGG CCAGTTCATA GCCGCTGACT TGGGATTTAG CCGTGTCCGT
ATCCTTTGA
|
|---|
| Protein sequence | MTPAMDKPRK TILLFGASGA IGSSIADLFL SRDWSVVGVT RSVRSGQANG VSWIIADPLA
GHVAADGYDE YAPYHAVCWA QGGNVNDSVY DVDVDAHLQL YQTNCIYILS SLKLLLQRSL
LAQPARLCVI SSIWQEIARQ NKLSYGMTKS ALRGLVLSAA ADLAADGHLV NAILPGALDT
PMTRENLTAE QIGELASATQ FGRLPQLGDV SRLAMFLCSE ENTGITGQFI AADLGFSRVR
IL
|
|---|
| |