| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1861 |
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| Symbol | |
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| ID | 3671526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1955614 |
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| End bp | 1958256 |
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| Gene Length | 2643 bp |
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| Protein Length | 880 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637710560 |
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| Product | hypothetical protein |
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| Protein accession | YP_315619 |
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| Protein GI | 74317879 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGCT TTCCTGGTCA AATTGGCACG CGGCATCAAG GCGGCTTCAG CCTGGTCGAG
GCGCTGTTTT CCGCATTGAT ACTGGCCGTC GCGCTGCTCG GACTGGCCGG GTTCCATGCG
GCCGCCATGC AGGACGGCAG CCTCGTCAAG GCGCGCTCGA TCGCGGCCAG CCTGGCTCAG
GAGAAACTGG ATGACCTGCG CGGTTTTACC CGCCTCGAAG ACGACGCCAC TACGACGGGC
GTGAACGAAT GTGCCGACCC GACGTTCTGT TTCAGTGAAA TCGCCAATAA CGCCGGGGGA
CGCGAAAACA GCGGCAGTCT GCTCCTTCCC TCGGGAACGG TCAGTGGTTA CACCGACAGC
TATTCGCTCG AATGGGCTGT GACCTGCGCG GCCGAAACGG CCGGCAGCGC ATTGAGTTTT
AGCAGCACCT GCACGGACCC GACCGCAAAG CTGGCAACCG TGACCGTTTC CTGGACCGAC
AGCAAGGGCG GACCTCAGGA GGTCGAATTG CAGGGCGTGA TCTATGCGAT GGATCCGGCG
CGTATGGCGA TGGGGACGGC CAGTGCCTTT TCGACGCAAA AACCCGTGGC AGGTTATACG
CCTGTCGGGG TGCCGGACGC TGTTCCTGTT CCGATCAACA CCGGGGGCTC CCAGTTCAAG
GAATCGAGCA AGCCGCTGCC CGAAGTCTCC CAGAGCGGTG ACGGGATCAA CGTGAGCTTC
GACTCGGTCG TCTACTCGCG CGACGGCGCA GGCTACCAGA AGGATTCGCA GGAAGAATTC
AGCAGCGTTA CCTGCGAGTG TCAGTTCAAC AGCGGGACCG GCACAGGCTA CACGCCCACG
CGCAAGGTAT GGAACGGCTC CCGACTGGTG AACCAGGCCG GTGAAGCCGT CACCAAGAAA
ACAGGGCAGC CCCTCGGCAA CAACCCGCCG TCCCAGTGCG ACGTCTGCTG TCGTGACCAC
CACGACCGCG CCGCCAACGA CCCGAAGTAC GATCCGAAGC GGCCCACTTC CGACTACACG
GGCAGCGAAG ATCACAAACA TTATTGGTAT TCGAGCTGCG TCAGTGGCGG GGTGGGTGCG
GCGAACTGCA CCGACGCCAA CAAGGATGCA AGCCTCGCTT CGGGCTCGGC CTTCACCGAA
GTCACCGACG GGGCTTACCT CGAGTCGTGC CGCGTCGGAC GCGTCGACGG TTTCTGGCGC
GTGATGCAGG ACTGGCAGCT GCGCAAGGTC ACCATCCTTC CGTACAACTT CCTGCTGAAT
AATCAGACCA ACCTGAACAA TTACGTCGAC GTCGTCGAGA AGGTTGTGGA AAACGCAGTG
AAGACAGACT CCGGCGGCTC CGGCGTTACC GTGCCGACGC TGGGTGGACG CGATCTGACA
CTTCCCTCAG GTTCCGATCC GGTGCAGCTA CTGTCGCGGG CGGTCTACGT CGACACGATA
TACAACGCCG AAGACGATCC GGCGACCTCG AGCGTGAACG AGCAAAACAC CGTCGACACG
GCGTACTACT CAGCGTTGCT TGCCAAGGTC ACTGCCAGTC AGACCGCGTC GAACTCGGCG
TGGCTGGAAT TCGCGCCATT CTACGAAGCC AATCTCACGC TGCTCTTCGA CTGGATATCC
TCGGACACCG GTGTCGCCAC CGTGACCAGC GAAGCCATCA ACGCGATTGT CGACCCCGTG
AACAGGTATT ACGGCAGCTT CAGCCGTGGC AAGGTGACCG TGCAGAGCGG CACAACCGCG
GGGACGTCGA CGATTACGGC CAAGGCCCGG CTTTCCAACA GCGGCGTGAC GGGTGGCGTC
AACGTTAACG TAAATCCCAC CCCCCCAACT TATGTGCCCG GCGTGAGCTA CGGTACCGAT
GTATACGACA ATCTGAGCAG CAATGTGCTG GCCGACACGA TCACCGTGAG CCGTCCGGCC
GCGGGGACGG CACATTCCAT CACGGGGAAG GTCGTGAAAG GGAATGGATC TGCCAACGTG
GCCGAGACGG GCACCCCGGC ATCGCCGATC ACGGTGACGC TCAACACGAC GTCGGGCTCG
GTCATCAGCC CATGCAGTGC CCAGGTCGGC GACTCGGATG TTTACGCGTG GTACTACTCG
TGTACCGTCT CGAACGGCTG GACCGGCACC CTGACCGTCG GCAGTACGGG ATCGGTATAC
ACGTTCGACG ACGCTACCAG CAGATCGCTC TCCACTTCGT CCATGACAGT GGCTAATGCG
ACGACGGTCG GCCAGGTCAT CGCCTTCGGC GACACGGTGA CCCTGACTGG CCAAATCACG
AACGCCAACT TCCCGAACGG AGCACCGCAG CCGGCTGTTA CCGCGGCCGA CACGGCGATT
ACGTTCAGCG GAACATCCAG CGGTACTTGC ACCAACAAGG CTGTGACGGG CGCTGGCAGT
AACGAGAAGC TGGTCTACTC CTGCGTCGTG CCGAAAGGAT GGACCGGCGC CATTACCATC
GCCGTCGATC CCACCGGGGG GACGTATACC TATCTCTCGC CAGGCGGTAC GCCTTGCAAC
GGATCGACCA CGGGTTCCTG CACCCTGGCA TCGATAACCT CGGCGCTGGC GGATGTGGAT
GGTACCTCGA GCTCGGCGAC GCTCCTGCAA AAACAACAAA CCAACGTCGA GGCGCGGCGC
TGA
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| Protein sequence | MPRFPGQIGT RHQGGFSLVE ALFSALILAV ALLGLAGFHA AAMQDGSLVK ARSIAASLAQ
EKLDDLRGFT RLEDDATTTG VNECADPTFC FSEIANNAGG RENSGSLLLP SGTVSGYTDS
YSLEWAVTCA AETAGSALSF SSTCTDPTAK LATVTVSWTD SKGGPQEVEL QGVIYAMDPA
RMAMGTASAF STQKPVAGYT PVGVPDAVPV PINTGGSQFK ESSKPLPEVS QSGDGINVSF
DSVVYSRDGA GYQKDSQEEF SSVTCECQFN SGTGTGYTPT RKVWNGSRLV NQAGEAVTKK
TGQPLGNNPP SQCDVCCRDH HDRAANDPKY DPKRPTSDYT GSEDHKHYWY SSCVSGGVGA
ANCTDANKDA SLASGSAFTE VTDGAYLESC RVGRVDGFWR VMQDWQLRKV TILPYNFLLN
NQTNLNNYVD VVEKVVENAV KTDSGGSGVT VPTLGGRDLT LPSGSDPVQL LSRAVYVDTI
YNAEDDPATS SVNEQNTVDT AYYSALLAKV TASQTASNSA WLEFAPFYEA NLTLLFDWIS
SDTGVATVTS EAINAIVDPV NRYYGSFSRG KVTVQSGTTA GTSTITAKAR LSNSGVTGGV
NVNVNPTPPT YVPGVSYGTD VYDNLSSNVL ADTITVSRPA AGTAHSITGK VVKGNGSANV
AETGTPASPI TVTLNTTSGS VISPCSAQVG DSDVYAWYYS CTVSNGWTGT LTVGSTGSVY
TFDDATSRSL STSSMTVANA TTVGQVIAFG DTVTLTGQIT NANFPNGAPQ PAVTAADTAI
TFSGTSSGTC TNKAVTGAGS NEKLVYSCVV PKGWTGAITI AVDPTGGTYT YLSPGGTPCN
GSTTGSCTLA SITSALADVD GTSSSATLLQ KQQTNVEARR
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