Gene Tbd_1829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1829 
Symbol 
ID3671494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1929143 
End bp1929541 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content68% 
IMG OID637710528 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_315587 
Protein GI74317847 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.183406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGAGA TCTCGACCAA ACCCTACCTG ATCCGCGCGC TATACGAATG GTGCGCCGAC 
TCCGGGTACA CGCCGCAGCT CCTGGTCGCG GTCGACGGGC GTACCCGCGT GCCGCCTGCC
TACGTCAAGG ACGGCCAGAT CGTGTTGAAC ATCAGCGCGG GTGCGACCCG CAACCTGACG
CTCGATAACG AGTGGATCCA GTTCTCCGCG CGCTTCGGCG GCGTCTCGCA CGAGATTTCG
GTGCCGGTGG ATCGCGTCGC CGCGATCTTC GCCCGCGAGA ACGGGCAGGG CCTGCATTTC
GAGCCGGTCG ACGCAGGCGG TCCGACGGAA CCGGCGCCTC CCGCCCAGGG CGACGCCGCG
CCGCCCAAGG GCAGGCCCTC GCTCAAGGTC GTCAAGTAA
 
Protein sequence
MAEISTKPYL IRALYEWCAD SGYTPQLLVA VDGRTRVPPA YVKDGQIVLN ISAGATRNLT 
LDNEWIQFSA RFGGVSHEIS VPVDRVAAIF ARENGQGLHF EPVDAGGPTE PAPPAQGDAA
PPKGRPSLKV VK