| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1693 |
|---|
| Symbol | |
|---|
| ID | 3671275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 1782860 |
|---|
| End bp | 1785352 |
|---|
| Gene Length | 2493 bp |
|---|
| Protein Length | 830 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637710382 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_315451 |
|---|
| Protein GI | 74317711 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.349675 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.545825 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAC GTCTGCCCCA CCTGATCTTC AACAGCACAG CAATAACAAA GCAGTACCAA
CGACCCAGCC GCAAGATTGA CATCGAATTC CCCCTTAAGG AGCGAGACCG CCAGCAGCAC
GGCGCACAAC TTCTGGAAGC TTTGCGCCAA GCCAAAACTC AGGAACCCGG CATCATCTCG
GGACAGCAGA CATTGGGCCG CGATGCCGAA TTCACTGGCG TGTACCTAAC TTTCGAAAGC
GACCCTGGTT TTGAACTGGC CTTCGAAAGC TTGGGCTTCG CCCCGAGCAG AATCGAACTA
CTGGTGGTCA AGCAGGAAGG CGAACGAATG CTAGCCACCG TTTTCGTACC GGAAGGCAAA
ATCGGCTACT TCATCCGTCG GGTGGAGGCT TATCTAAATG AGGGTAAGGA CAAACCCAAC
AAGAAGGGCG AACTCCGGCC CCAATACAAA AAACTGGTGG AAAGCATCGC CTCCATCCGT
TTGGCCGCGT TGGAAGCTCT CTGGACCGAC AGCCCCGATC TGTTCCCGCG CGATGAAACG
CCGATCTGGT GGGAAGTCTG GCTGCGCATC GGGGACGGTT TCGATGAAGT CGGTTTCTTC
CGCACCCACG CCGCACAACT GAATTTAGAA GTGGCCGATG ACGAAGTGCG TTTTCTCGAA
CGCTGTGTAG TCCTGGTGCG TGGCAGCCGC AGTCAACTCG CCCGTTCCCT GCAACTTTTG
GGTGGCATGG CTGAACTGCG CAAAGCGAAA CAGAATGCCG AGCACTACAC GACCATGAAT
GCTGTGCAAC AGCACGCTGC CGTTGCTGTC GCCGCGCAGT ATCTTCAGAC ACCAGGGCCG
GATGCCCCTG CTGTCTGCAT ATTGGACACT GGCGTCAGTC AGGATCACCC GCTGCTGGCC
CCCTTCCTTG ATGCCCATGA CAAACATGCC TGCCACCCGG ATTGGGGAAC CCATGATCAT
GATCGGTTGG GCCACGGCAC CGCCATGGCC GGTCTCGCTT TGCACGGCGA TCTGAGCGAA
ACCTTGGCCC AGCAGCCTTT TCCTTCTCCG AGTCACCGCT TGGAGTCGGT CAAAGTCTTG
CCGCCCACCG GCGACAACCC ACCTCATCTT TACGGCTATC GGTATAGCCA AGCGATGGAC
CGCGTGACGA TTACCGCACC CCACCGCCGC CGCACCTTCT GTTCTGCCGT GACTACCACC
GACTCCCGCG ACCGAGGTCG ACCCTCATCT TGGTCAGCGC AGTTGGACAA GCTGGCAAGC
GGCATGGAAG ACGGTACGCA ACGCCTGATC TTCCAGACTG CCGGTAACGC CGAGCATTCC
AACATTACTG ACTACCCCGC CAGCAACGCC CTCGACGGCA TCCACGACCC GGCCCAATCC
TGGAACGTAC TCACCGTCGG GGCCTACACA GGCAAGTGGC AGATTGACGA GGCAACCTAC
CCGGGTCGCC AGCCCATTGC CCCGGCGGGC GCACTCGCAC CTACCAGTTG CACCGCCGTG
AGTTGGCCCA CCAGCGGACG CCAGAAATGG CCCAACAAAC CGGACGTCGT ATTGGAAGGC
GGCAATTGGG CGCTGGACCC CGCTTTCAAC TTCGCCGAAG ACCTAGACAG CCTGCAACTC
CTCAGTACCG GGCACGAACC ACACACTAGG CCGCTGGTCA CTTTCGGCGA GACCAGCGCC
GCCACCGCCC TGGCCGCCCG CATGGCGGCT GTATTGCAAA GCCACTACCC CGACCTCTGG
CCTGAAACCT TGCGCGCCCT GCTGGTCCAC TCGTCGCAAT GGACGTCGGC CATGAGGGCG
GCGGTTGGCA ACCTTCAGGT CAAGGGCAAC GTTCGCCAGT TGCTTCGTAC CTGCGGCTTC
GGCGTGCCGC AACTCGACGA CGCCCTATGG AGCGCAAAAC ACGCCCTGAC GCTGATCGTA
CAGGACGAGA TGCAACCCTT CACTACTGGA GAGAACAGCA CGATCCGCGC TCGCGACATC
CACTACCACG CCCTGCCCTG GCCGGCAGAG GCGCTGCGGG CGTTGCCACT GGGTACGCAG
GTCGAGATGC GCGTCACCCT GTCCTACTTC ATCCAGCCCA ATCCCGGCCA ACGCGGTTGG
AGCGGAAAAT TCAGCTATGC CTCCCACGGC CTGCGCTTCC GAGTAAAAGC GCCGGGGGAA
AGCCACGAAG CCTTCGAACA ACGCATAAAT CAGGCCGCCC GCGACGAGGA ATACGAACGC
ACTGGCGTCA GCGACAGTGA TTTCTGGGTA GTCGGCTCCG ACACCCGCGA ACTCGGCTCA
TTGCATTCCG ACCTCTGGCA AGGCACGTCC GAGCAACTCG CCGATTGCGG CTACCTCGCC
ATCTACCCCG TCACCGGCTG GTGGCGCACC CGCAAAGCCC TGAACCGCTG GCACTCCCGC
GCCCGCTACG CCCTTGTGGT CAGCATCCGC ACTCCCGAGG AGTTGGTGGA TATCTACACG
CCAGTGGCGG CGGAAATTGG CATCGCGGTC TGA
|
|---|
| Protein sequence | MAERLPHLIF NSTAITKQYQ RPSRKIDIEF PLKERDRQQH GAQLLEALRQ AKTQEPGIIS
GQQTLGRDAE FTGVYLTFES DPGFELAFES LGFAPSRIEL LVVKQEGERM LATVFVPEGK
IGYFIRRVEA YLNEGKDKPN KKGELRPQYK KLVESIASIR LAALEALWTD SPDLFPRDET
PIWWEVWLRI GDGFDEVGFF RTHAAQLNLE VADDEVRFLE RCVVLVRGSR SQLARSLQLL
GGMAELRKAK QNAEHYTTMN AVQQHAAVAV AAQYLQTPGP DAPAVCILDT GVSQDHPLLA
PFLDAHDKHA CHPDWGTHDH DRLGHGTAMA GLALHGDLSE TLAQQPFPSP SHRLESVKVL
PPTGDNPPHL YGYRYSQAMD RVTITAPHRR RTFCSAVTTT DSRDRGRPSS WSAQLDKLAS
GMEDGTQRLI FQTAGNAEHS NITDYPASNA LDGIHDPAQS WNVLTVGAYT GKWQIDEATY
PGRQPIAPAG ALAPTSCTAV SWPTSGRQKW PNKPDVVLEG GNWALDPAFN FAEDLDSLQL
LSTGHEPHTR PLVTFGETSA ATALAARMAA VLQSHYPDLW PETLRALLVH SSQWTSAMRA
AVGNLQVKGN VRQLLRTCGF GVPQLDDALW SAKHALTLIV QDEMQPFTTG ENSTIRARDI
HYHALPWPAE ALRALPLGTQ VEMRVTLSYF IQPNPGQRGW SGKFSYASHG LRFRVKAPGE
SHEAFEQRIN QAARDEEYER TGVSDSDFWV VGSDTRELGS LHSDLWQGTS EQLADCGYLA
IYPVTGWWRT RKALNRWHSR ARYALVVSIR TPEELVDIYT PVAAEIGIAV
|
|---|
| |