| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1581 |
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| Symbol | |
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| ID | 3672062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 1664418 |
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| End bp | 1665608 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637710268 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_315339 |
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| Protein GI | 74317599 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0301644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTGC GCGCAAAAAT CGGAATGGCG GTGACGGCAG CCCTCGTGCT CGGCGGCCTC
GCGCTCGGCT TCGCGCCGCG TGCGGTGCCG GTCGACCTCG CCGAGGTCAC ACGCGGGCCG
CTCGCCGTCA CGGTCGAAGA GGAGGGCAAG ACCCGCGTGC GCGAGCGCTA CCTGGTTTCG
GCGCCGGTCG CGGGCTATCT GCGGCGGATC GGCCTCGACG CCGGCGACGC GGTTGCGCGC
GGCCAGGTGC TCGCCGTGAT CGACCCGGCA CGCTCGGTCG CGCTCGACCC GCGCACGCGT
GCCGAAGCCC AGGCGCGGGC GAGCGCGGCC CGCGCGGCGC TCGCCGCCGC CGAGGAAAAC
GCGCGCGCGG CAGCGGCCTC GGCGCAGCTC GCGCAGCAGG AACGCGCGCG CGCCGAAACG
CTGCGTCGAT CCGATTTCGT TTCCGAACAG GCACTCGACA ACACCCGCAC GGCGGAGTCC
CAGGCCCGGG CGGCAGCCCG CGCGGCCGAG CACAACGTGC GGGTCGCGCG TTTCGAGCTC
GAAACGGCGC GTGCGGCGCT CGCGAGCAGC GCCCGTTTGC AGGGCGGCAC CGCCGAGGCG
CTCGAGGTGC GCGCGCCGGT CGCCGCACGC GTGCTCAAGC TCGTTCATGA AAGCGAGGGC
GCGGTCGCGG CCGGTGCGCC GCTGCTCGAA GTCGGCGACC CCGACAGTCT CGAAGTCGAG
GTCGAGGTGC TCTCCAACCA CGCTGTGAAG CTCGCGCCGG GGTCGAAAGT GATCCTCGAC
CGCTGGGGCG GCGAGCGTTC GGTCGCCGGC CGCGTGCGCG TCGTCGAACC GAGCGGGTTC
ACGAAGATTT CGGCACTCGG CGTCGAGGAG CAGCGCGTCC GCGTCATCGT CGACTTCAGC
GCGCCGCGCG AGGCGTGGAA CCGGCTCGGC GACGGCTACC GCGTCGAGGC GCGCTTCGTG
TTGTGGGAAG GCGAGAACGT GCTGCAGGTG CCGACGAGCG CGCTTTTCAG ACAGGGGCAG
GGCTGGGCGG TCTTCGTCGT CGACGGCCGC CGCGTGCGCG TCGCGCCGGT CGAAGTCGGC
CAGCGCGCCG GGCTCGCGAC CGAGGTGTTG GCGGGCGTTG CGGCAGGCGA CCGCATCGTC
GCGCATCCCG ACGAGACGAT CGAGGACGGC GTGCGGGTGA AGCCGCGCTG A
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| Protein sequence | MRLRAKIGMA VTAALVLGGL ALGFAPRAVP VDLAEVTRGP LAVTVEEEGK TRVRERYLVS
APVAGYLRRI GLDAGDAVAR GQVLAVIDPA RSVALDPRTR AEAQARASAA RAALAAAEEN
ARAAAASAQL AQQERARAET LRRSDFVSEQ ALDNTRTAES QARAAARAAE HNVRVARFEL
ETARAALASS ARLQGGTAEA LEVRAPVAAR VLKLVHESEG AVAAGAPLLE VGDPDSLEVE
VEVLSNHAVK LAPGSKVILD RWGGERSVAG RVRVVEPSGF TKISALGVEE QRVRVIVDFS
APREAWNRLG DGYRVEARFV LWEGENVLQV PTSALFRQGQ GWAVFVVDGR RVRVAPVEVG
QRAGLATEVL AGVAAGDRIV AHPDETIEDG VRVKPR
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