Gene Tbd_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1387 
Symbol 
ID3672488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1466682 
End bp1467269 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content66% 
IMG OID637710072 
Productmembrane protein 
Protein accessionYP_315145 
Protein GI74317405 
COG category[S] Function unknown 
COG ID[COG4244] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTT ATCATCCCGA TATCCCAAGC ACGGCCCAGG TCGCGGGGCA CCCGATCCAC 
CCCATGCTCG TTCCGTTCCC GATCGCCTTT CTGGTCACTG CACTGATCAC GGACCTGACC
TATCTCAATA CCGAGGATCC ATTCTGGGCG CTGGCTTCGC TGTGGCTGCT GCGCGCGGGC
CTCGTGATGG GCATCCTCGC GGCCGTGTTC GGTCTGGTCG ACTTCTATTC GCGGCGCACG
ATCCGCGACC ACAAGATCGC CTGGTACCAC TTCATCGGCA ACGCGACGGT ACTGATCCTT
GCATGGGTCA ACGTCTCGAT GCGCAACGAG GCGCCAATCG ACGGCCTCAC CCCCGCCGGG
ATCACGCTTT CGGCCGTGGT CGCCGGCATT TTGCTCGTCA CGGCCTGGCT TGGCGGCGAG
ATGGCCTACC GACATCACAT CGGCGCGGTT CCCGCCGCGC GCGAATCGGT GACCGTCGAA
CGAACGCCGC CGGGGGCGCG GCCGTCGACG ATGGCGTCGA GCTACGTCCC GGCCGGGCAC
GAACGTCGCA CCGGACCGGG AGACCGCCGC AACCACGTCG CCGCCTGA
 
Protein sequence
MALYHPDIPS TAQVAGHPIH PMLVPFPIAF LVTALITDLT YLNTEDPFWA LASLWLLRAG 
LVMGILAAVF GLVDFYSRRT IRDHKIAWYH FIGNATVLIL AWVNVSMRNE APIDGLTPAG
ITLSAVVAGI LLVTAWLGGE MAYRHHIGAV PAARESVTVE RTPPGARPST MASSYVPAGH
ERRTGPGDRR NHVAA