Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1387 |
Symbol | |
ID | 3672488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1466682 |
End bp | 1467269 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637710072 |
Product | membrane protein |
Protein accession | YP_315145 |
Protein GI | 74317405 |
COG category | [S] Function unknown |
COG ID | [COG4244] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTTT ATCATCCCGA TATCCCAAGC ACGGCCCAGG TCGCGGGGCA CCCGATCCAC CCCATGCTCG TTCCGTTCCC GATCGCCTTT CTGGTCACTG CACTGATCAC GGACCTGACC TATCTCAATA CCGAGGATCC ATTCTGGGCG CTGGCTTCGC TGTGGCTGCT GCGCGCGGGC CTCGTGATGG GCATCCTCGC GGCCGTGTTC GGTCTGGTCG ACTTCTATTC GCGGCGCACG ATCCGCGACC ACAAGATCGC CTGGTACCAC TTCATCGGCA ACGCGACGGT ACTGATCCTT GCATGGGTCA ACGTCTCGAT GCGCAACGAG GCGCCAATCG ACGGCCTCAC CCCCGCCGGG ATCACGCTTT CGGCCGTGGT CGCCGGCATT TTGCTCGTCA CGGCCTGGCT TGGCGGCGAG ATGGCCTACC GACATCACAT CGGCGCGGTT CCCGCCGCGC GCGAATCGGT GACCGTCGAA CGAACGCCGC CGGGGGCGCG GCCGTCGACG ATGGCGTCGA GCTACGTCCC GGCCGGGCAC GAACGTCGCA CCGGACCGGG AGACCGCCGC AACCACGTCG CCGCCTGA
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Protein sequence | MALYHPDIPS TAQVAGHPIH PMLVPFPIAF LVTALITDLT YLNTEDPFWA LASLWLLRAG LVMGILAAVF GLVDFYSRRT IRDHKIAWYH FIGNATVLIL AWVNVSMRNE APIDGLTPAG ITLSAVVAGI LLVTAWLGGE MAYRHHIGAV PAARESVTVE RTPPGARPST MASSYVPAGH ERRTGPGDRR NHVAA
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