| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1385 |
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| Symbol | |
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| ID | 3672486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1463375 |
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| End bp | 1465636 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637710070 |
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| Product | hydrogenase maturation protein HypF |
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| Protein accession | YP_315143 |
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| Protein GI | 74317403 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGC GCATCGCGCA ATTCATCACG ATCGGCGGGC GCGTGCAGGG GGTCGGCTTT
CGGCCTTTCG TCTACCGCGC CGCGCGCGCG CACGCGCTTG CAGGATGGGT GCGCAACGCT
AACGGATCGG TGGAAATTCA CGTCGAAGGC GAACGCGCGC AGTTGCAAGG TTTCGTCGAC
ACGCTGCTGA ACGAGGCGCC GCCGCTGTCG GCGCCCGGCC CGCTAGCGAT CCGGCCGTGC
GCGTCCACCC GGCTTCGCGG CTTCTCGATT CTCGACAGCA CGGCGGCGAG CGAAGCCGAC
GTCCATCTTC CGGCAGACGG TTTCGTCTGC GCCGACTGCC TCAACGAACT GCACGATCCG
GCCAACCGCC GCTACCGCTA CCCCTTCATC AACTGCACGC AGTGCGGCCC GCGCTACACG
CTCATCACCG GCCTGCCCTA CGACCGGCCA ATGACCGCGA TGCGCGGTTT CACGCTGTGC
GCGGCGTGCC GGCGCGAATA CGAGGACGCG GGCGACCGCC GTTTCCATGC CGAGCCAATC
GCGTGCCCGG TGTGCGGGCC GCATCTGCAA TTCGTGTCGG GCGACAAGAC CCTCAGCGGT
GACGAGACGG CACTGGCAGC CGCCGTGGCC CAGCTGCGCG CAGGAAAAAT CGTTGCGGTG
AAAGGCGTCG GCGGCTACCA CCTGATGTGC GACGCGCGCA ACGACCCGGC CGTCGCCGCA
CTCCGTGCGC GCAAGCCGCG GCCGGCCAAA CCGCTCGCCG TGATGTTTCG CGACCTCGAC
AGCCTGCGCG ACGCGGTCCA TTTCGACACG GACGACGCGG CGCTGCTGAG CTCGCCCGCG
CGGCCGATCG TGCTGCTGCG GAAGCGCAAC ACAAACCCGC TTTCAGCTGC CATTGCGCCG
GGCCTCGGCG AAATCGGCTG CATGCTCCCC TACTCGCCCC TGCACGATCT CCTGCTGCAC
GATTTCGGCG GACCGCTCGT CGCAAGCTCC GGCAACCTTT CGGGCGAACC GGTGCTGACC
GCCAATGCCG AGGCACAGGC GCGGCTGAGG CATCTCGCCG ACGCCTTCCT GCATCACGAC
CGGCCGATCG TGCGCCCCGC CGACGACCCG GTCTACCGCC GAATCGCCGG CGCGCCACGG
CCCTTGCGCC TCGGCCGCGG CCTCGCACCG CTCGAACTCG AACTGCCCGC CGCACTCGCG
CAGCCCGTTC TCGCGCTCGG CAGCCACATG AAAAACACGG TCTGCCTCGC CTGGGGAACG
CGCGCGGTCG TCTCGCCGCA CATCGGAGAA CTCGACAGCG CACGCAGTCT GGACACGCTC
GCCCGGGTCG CCGCCGATCT GCAAGACCTG TATCAGGTTC GCGCCGCGAC GCTGCTTGTC
GATCATCACC CCGGCTTCGG CTACCGCCGC TTCGCGCGCG ACAGTGGCCT GCCTCTCGCT
GCGGTCTGGC ATCACCACGC GCACGCCTCC GCGCTCGCGG CCGAGTTTGA GGATATTTCG
GAGTGGATCG TCTTCGCCTG GGATGGGGTC GGATTGGGCG AAGACATGAG CCTGTGGGGC
GGCGAAGCCT TCGCCGGCGC GCCCGGGCGC TGGCGGCGCG CCGCCTCCTG GCGCCCGTTC
CGGCTCCCCG GCGGGGACAA GGCCGGACGT GAACCCTGGC GCGCGGCGGC GGCACTGCTC
TGGGAAACTG GCGCGCCGGC GGCCTTCGCG CCACCCGCCC TGCACCAGGC GTGGGCGGCG
CGGCTCAACA GCCCGGGCAG CTCGTCGGTC GGCCGGCTCC TCGACGCGGC GGCAGCGCTC
TGCGGAATCT GTACCGAGGC GAGCTTCGAG GGCGAGGCGC CGATGCGTAT CGAAGCGTGC
GCAAGCGATA TCGCACCCGA CGGCACGTGC ATCGACGCCG CGGCGCTCAC GCTGCCGCTC
GCCGCCGACG CCCAAGGCGT CTGGCGCAGC GACTGGGCCC CGTTGCTGCC TATGCTTGCC
GACGCGACCC AGCCGGCCTC GCGCCGCGCT GCCCGCTTCC ACCTGAGCCT CGCCGAAGCA
CTGGTCGCGC AGGCGAAGCA GCTGCGCGGC GATACCGGCA TCCGCACCGT CGGCCTGACC
GGCGGCGTTT TCCAGAACCG GCTGCTCACC GAGACCGCGG CGCTGGCCCT CGCGGCGGCG
GGATTTTCGG TCCGCCTGCC GCAGCGCGTA CCGATGAACG ACGCCGGCCT GAGCTTCGGC
CAGGTCATCG AGTTCCTATA CCGACAACAC ACCAAGACAT GA
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| Protein sequence | MPERIAQFIT IGGRVQGVGF RPFVYRAARA HALAGWVRNA NGSVEIHVEG ERAQLQGFVD
TLLNEAPPLS APGPLAIRPC ASTRLRGFSI LDSTAASEAD VHLPADGFVC ADCLNELHDP
ANRRYRYPFI NCTQCGPRYT LITGLPYDRP MTAMRGFTLC AACRREYEDA GDRRFHAEPI
ACPVCGPHLQ FVSGDKTLSG DETALAAAVA QLRAGKIVAV KGVGGYHLMC DARNDPAVAA
LRARKPRPAK PLAVMFRDLD SLRDAVHFDT DDAALLSSPA RPIVLLRKRN TNPLSAAIAP
GLGEIGCMLP YSPLHDLLLH DFGGPLVASS GNLSGEPVLT ANAEAQARLR HLADAFLHHD
RPIVRPADDP VYRRIAGAPR PLRLGRGLAP LELELPAALA QPVLALGSHM KNTVCLAWGT
RAVVSPHIGE LDSARSLDTL ARVAADLQDL YQVRAATLLV DHHPGFGYRR FARDSGLPLA
AVWHHHAHAS ALAAEFEDIS EWIVFAWDGV GLGEDMSLWG GEAFAGAPGR WRRAASWRPF
RLPGGDKAGR EPWRAAAALL WETGAPAAFA PPALHQAWAA RLNSPGSSSV GRLLDAAAAL
CGICTEASFE GEAPMRIEAC ASDIAPDGTC IDAAALTLPL AADAQGVWRS DWAPLLPMLA
DATQPASRRA ARFHLSLAEA LVAQAKQLRG DTGIRTVGLT GGVFQNRLLT ETAALALAAA
GFSVRLPQRV PMNDAGLSFG QVIEFLYRQH TKT
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