| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_1294 |
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| Symbol | |
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| ID | 3673384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 1365769 |
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| End bp | 1366938 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637709979 |
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| Product | type II secretion system protein F |
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| Protein accession | YP_315052 |
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| Protein GI | 74317312 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0082723 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAAGCG CGTCGGCGAT CGTCTCGCTC GTGCTCGAGG CGCCTGACGC CGCGAGTGCC
GAGGCGCGCG CCGCCGCCGA CGGCCTGACG GTGCTGTCGG TCCGCCGCCG TGCGAGCGGG
GACGGCTGGC GCCTCGGCCG CGCGAAGCGC TTCCCGCTCC AGCTTTTCAC GCAGGAACTG
CTGGCCCTGC TCAACGCGGG CCTCGCCCTG GTCGAGGCGC TCGAGGCGCT CGCCGAAAAG
GAGGCGCGGC CCGAGAGCAA AAGCGTTTTC GACCAGCTGC TGCGCGCGCT TTACGAAGGG
CAAACCCTGT CGGCGGCGCT CGAGAAGCTG CCGGCGGTTT TTCCCGCGCT CTACGTCGCG
AGCATCCGGG CGAGCGAGAA AACCGGCGAC CTGCCGGAGA CGCTGCGCCG CTACATTGCC
TACCAGGCCC AGCTCGACGT GATCCGCAAG AAACTCGTCA GCGCGTCGAT CTACCCGCTC
GTGCTCATCG GCGTCGGCGG GCTCGTCGCG CTGTTCCTGA TGGCCTACGT CGTGCCGCGC
TTCAGCGAAG TCTATGAAGG CCTGGACGGC GACCTGCCGC TGATGTCGCG TCTGCTCATG
CAGTGGGGCC AGTTGCTTGA ACAGCACGGC AGTGCGGTGC TGCTCGTGCT GGCGGCGCTG
CTGGCGGGCC TCGTCTTCGG TCTCACCCGG CCGGCGCTCA GGGCCTGGGC GGGACAAAAG
CTCTGGCAGA TTCCATCGGT CGGCGAGCGC ATGCGCGTCT ACCAGCTCGC GCGTTTCTAC
CGCACGCTCG GCATGCTGCT CGCCGGCGGC GTCTCGATCG TGCCGGCCCT CGACATGGCG
TCGGGAATCC TCCATGCCTC GCTGCGTGAC GGCCTTGCAC GGGCCGGCGC GCGCATCCGC
GAGGGGCAGC CGATCTCGTT CGCGATGGAA GCCAATGGTC TGACCACCCA GGTCGCGCTG
CGCATGCTGC GCGTCGGCGA GCGCACCGGG CAGATGGGCG AAATGATGGA GCGCATCGCG
GCCTTCTACG ACGAGGAAAT GGCGCGCTGG GTCGACTGGT TCACCAAGCT GTTCGAGCCC
TTGCTGATGG CCGTGATCGG GGTCGTCATC GGCGCACTCG TGGTCCTGAT GTACATGCCG
ATCTTCGAAC TCGCGGGGAG CATTCAATGA
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| Protein sequence | MGSASAIVSL VLEAPDAASA EARAAADGLT VLSVRRRASG DGWRLGRAKR FPLQLFTQEL
LALLNAGLAL VEALEALAEK EARPESKSVF DQLLRALYEG QTLSAALEKL PAVFPALYVA
SIRASEKTGD LPETLRRYIA YQAQLDVIRK KLVSASIYPL VLIGVGGLVA LFLMAYVVPR
FSEVYEGLDG DLPLMSRLLM QWGQLLEQHG SAVLLVLAAL LAGLVFGLTR PALRAWAGQK
LWQIPSVGER MRVYQLARFY RTLGMLLAGG VSIVPALDMA SGILHASLRD GLARAGARIR
EGQPISFAME ANGLTTQVAL RMLRVGERTG QMGEMMERIA AFYDEEMARW VDWFTKLFEP
LLMAVIGVVI GALVVLMYMP IFELAGSIQ
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