Gene Tbd_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1257 
Symbol 
ID3673347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1319398 
End bp1320063 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID637709942 
Productcondensin subunit ScpB 
Protein accessionYP_315015 
Protein GI74317275 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGC AGCCGAGTGA CAATCCCGAC GACCTCAAGG TCGTTCTCGA AGCCGCGTTG 
CTGGCGGCGA TCGAACCGCT GACGCCCGCG GAACTCAAGC GCATGTTCGA GCACGAGCTG
TCGAACGAGA CCTTGCGTCG CGCGCTCGAC GAACTGCGCG CGGCCTGGCA CGGGCGCGGC
GTCGAACTGA TCCAGGTCGC GGACGGCTGG CGTTTCCAGA CCCGCGCCGA GATGCAGCCC
TGGCTATCGC GGCTCAAGAA CGAGAAGCCG CCGCGTTACT CGCGCGCCGT GCTCGAGACG
CTCGCGATCA TCGCGTATCG CCAGCCGGTG ACGCGCGGCG ACATCGAGGA CGTGCGCGGC
GTCGCGGTCA ACCCCAACAT CATCAAGGCG CTCGAAGAGC GGGGCTGGAT CGAGGCGATC
GGCCATCGCG ACGTCCCGGG CCGGCCCGCG CTGTTCGGCA CCACCGGCCA CTTCCTCAGC
GATCTCGGCC TGCGCACGCT GTCCGAGCTC CCGCCGCTGG AGGAACTCGG CACGCTCGTG
ACGCCCGACG AAACCGCATT GATTCCTGAA CTGCGCGAGG AATTGCAGGA CAATGACGCC
GCGCCGGCAT TCGGCGCAGT GATCGAAACC GCCGCGCCCG CCGGCGCGGT CACCGAGAAT
ATCTGA
 
Protein sequence
MNLQPSDNPD DLKVVLEAAL LAAIEPLTPA ELKRMFEHEL SNETLRRALD ELRAAWHGRG 
VELIQVADGW RFQTRAEMQP WLSRLKNEKP PRYSRAVLET LAIIAYRQPV TRGDIEDVRG
VAVNPNIIKA LEERGWIEAI GHRDVPGRPA LFGTTGHFLS DLGLRTLSEL PPLEELGTLV
TPDETALIPE LREELQDNDA APAFGAVIET AAPAGAVTEN I