Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1257 |
Symbol | |
ID | 3673347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1319398 |
End bp | 1320063 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637709942 |
Product | condensin subunit ScpB |
Protein accession | YP_315015 |
Protein GI | 74317275 |
COG category | [K] Transcription |
COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGC AGCCGAGTGA CAATCCCGAC GACCTCAAGG TCGTTCTCGA AGCCGCGTTG CTGGCGGCGA TCGAACCGCT GACGCCCGCG GAACTCAAGC GCATGTTCGA GCACGAGCTG TCGAACGAGA CCTTGCGTCG CGCGCTCGAC GAACTGCGCG CGGCCTGGCA CGGGCGCGGC GTCGAACTGA TCCAGGTCGC GGACGGCTGG CGTTTCCAGA CCCGCGCCGA GATGCAGCCC TGGCTATCGC GGCTCAAGAA CGAGAAGCCG CCGCGTTACT CGCGCGCCGT GCTCGAGACG CTCGCGATCA TCGCGTATCG CCAGCCGGTG ACGCGCGGCG ACATCGAGGA CGTGCGCGGC GTCGCGGTCA ACCCCAACAT CATCAAGGCG CTCGAAGAGC GGGGCTGGAT CGAGGCGATC GGCCATCGCG ACGTCCCGGG CCGGCCCGCG CTGTTCGGCA CCACCGGCCA CTTCCTCAGC GATCTCGGCC TGCGCACGCT GTCCGAGCTC CCGCCGCTGG AGGAACTCGG CACGCTCGTG ACGCCCGACG AAACCGCATT GATTCCTGAA CTGCGCGAGG AATTGCAGGA CAATGACGCC GCGCCGGCAT TCGGCGCAGT GATCGAAACC GCCGCGCCCG CCGGCGCGGT CACCGAGAAT ATCTGA
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Protein sequence | MNLQPSDNPD DLKVVLEAAL LAAIEPLTPA ELKRMFEHEL SNETLRRALD ELRAAWHGRG VELIQVADGW RFQTRAEMQP WLSRLKNEKP PRYSRAVLET LAIIAYRQPV TRGDIEDVRG VAVNPNIIKA LEERGWIEAI GHRDVPGRPA LFGTTGHFLS DLGLRTLSEL PPLEELGTLV TPDETALIPE LREELQDNDA APAFGAVIET AAPAGAVTEN I
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