Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1230 |
Symbol | |
ID | 3673319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 1288506 |
End bp | 1289918 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637709914 |
Product | extracellular solute-binding protein |
Protein accession | YP_314988 |
Protein GI | 74317248 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4623] Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCC TCAAGACAAA GGGAGCGGCC GGGAAATTCG CTTCGTTGCT GCTGGTGCTC GCGCTGAGCG CCTGCAGCCG GCCCGCGCCG CCGCCGGAAA CGAGCGGCGA ATTGCGCGTC GGGACACGCA ACAGTCCGGC CACCTTTTAC ATCGGCCACG ACGGCGAAAC CGCGGGATTC GAACACGACC TCATCCTCGC ATTCAGCCGC GCACAAAACT GGACGCTCAG TTGGACCGAA AAGTCCCGGC CACAGGCGCT GTTCGACATG CTCGAGCGGC GCGAAATCCA TCTCGCGGCG GCTGCGCTGC CGCAGGCCGT GGTCAAGGAC CGCCACCTGA TCTCCGGTCC GATCCTGTTC GAGACCCCAG TCCACGTCGT CTATCGCACA GCCGATCGCG CGCCGCGCGG CGTCGCCGGA CTCGCCGGAA AAAAACTCGC ATTCATCATC GGCTCCGGGC ACGGCCCGAT GCTCATGCGG CTGAAACGCA AGCACCCGGA ACTCAGCTGG GCCGCGGTGG AGAACGTCTG GCCCGAGGAA TTGCTCGCGC AACTGCAGGC GGGCAAGTAC GACGCGGTGA TCATCAACGG CATGGATTTC GACGCGATGC GCAACTTCTA TCCCGGCCTC GCCGTCGCCT TCGATCTGCC GTACAAGCAA AAAATCGTCT GGGCGCTGTC GCCCGGCAGT TCGCACGCCT TTCGCAACGC GCTCGCACGC TTCGTCGAAC GCGCGCGCTC GGACGGCACG ATCAAGCGCG CGCTGGAACG CTACTTCGGG CACGTCAAGC GCCTGGGCAG CAGCGACATT CTCGGCATCC TGCAACGCCG CCCGCAACGC CTTCCAGACC TGCGCGAGCA TTTCCAGGAA GCGCAGACGC TGAGCGGAAT CGACTGGCGT CTGCTCGCCG CGATCGGCTA CCAGGAATCG CAGTGGAACC GTCTGGCGAC CTCGCCAACC GGCGTGCGCG GCGTGATGAT GCTGACCGGC GAGACGGCGG ACCGCATGGG GGTCAGCGAC CGCCTCAACG CGCGCGAGAG CATCCTCGGC GGCGCACGCT ATCTGGCGCT GTTGAAGGAC GCGCTTCCCG CACGCATCGC CGAGCCGGAT CGCACTTGGC TCGCGCTCGC TGCCTACAAC CAGGGTCAGG GCCACCTCGA GGACGCGCGG CGGATCGCGC AGGCACGCGG CGGCGACCCG AACAGCTGGG CGGACGTCAA GGAGGCGCTG CCCTACCTGA GCCGCGGCAG CTACGCGAAG GTCATGAAAT ACGGCTATGC GCGCGGCGGC GAAGCGCTGC GCTTCGCCGA GAACATCCGC AACTACTACG ACATCCTGCT GCGGCTCGAG CCCGAATACG ATCCCTTGAT CAATCTCGGG CGAGGCGAAG ACGGCCTGCC ACCGCCGGGC TGA
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Protein sequence | MPSLKTKGAA GKFASLLLVL ALSACSRPAP PPETSGELRV GTRNSPATFY IGHDGETAGF EHDLILAFSR AQNWTLSWTE KSRPQALFDM LERREIHLAA AALPQAVVKD RHLISGPILF ETPVHVVYRT ADRAPRGVAG LAGKKLAFII GSGHGPMLMR LKRKHPELSW AAVENVWPEE LLAQLQAGKY DAVIINGMDF DAMRNFYPGL AVAFDLPYKQ KIVWALSPGS SHAFRNALAR FVERARSDGT IKRALERYFG HVKRLGSSDI LGILQRRPQR LPDLREHFQE AQTLSGIDWR LLAAIGYQES QWNRLATSPT GVRGVMMLTG ETADRMGVSD RLNARESILG GARYLALLKD ALPARIAEPD RTWLALAAYN QGQGHLEDAR RIAQARGGDP NSWADVKEAL PYLSRGSYAK VMKYGYARGG EALRFAENIR NYYDILLRLE PEYDPLINLG RGEDGLPPPG
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