Gene Tbd_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_1183 
Symbol 
ID3671544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp1242729 
End bp1243088 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content72% 
IMG OID637709867 
Productsuccinate dehydrogenase subunit D 
Protein accessionYP_314941 
Protein GI74317201 
COG category[C] Energy production and conversion 
COG ID[COG2142] Succinate dehydrogenase, hydrophobic anchor subunit 
TIGRFAM ID[TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.231416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCG CGACCGGCTC GCACACGGGG ACCGGAACCT GGCTCGTGCA GCGCGCGACG 
GCGGTCGTGC TCGCGCTGGC CCTGCCGCTC CTGCTGCTGC GCTTTCTCGC CGCGCCGCCG
CTCGACTTCG CCGCCTGGCA GGCGCTGCTC GCGCCGCTCT GGCTGCGTCT GCTGATGCTG
CTCGCGGCCG GCGCGCTGGC CCTTCACGCC TGGGTCGGCG TGCGCGACAT CCTGATGGAT
TACGTCCATG CGACCGGACT GCGCCTGACG ATATATATGG CCGTGATCGG CACCCTGGCG
ACGAGTGTCG CGTGGCTCGC CGCGATCCTG TTCGGCCCGG TCTTCGGGCG CGCGGCGTGA
 
Protein sequence
MKAATGSHTG TGTWLVQRAT AVVLALALPL LLLRFLAAPP LDFAAWQALL APLWLRLLML 
LAAGALALHA WVGVRDILMD YVHATGLRLT IYMAVIGTLA TSVAWLAAIL FGPVFGRAA