Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_1183 |
Symbol | |
ID | 3671544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 1242729 |
End bp | 1243088 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637709867 |
Product | succinate dehydrogenase subunit D |
Protein accession | YP_314941 |
Protein GI | 74317201 |
COG category | [C] Energy production and conversion |
COG ID | [COG2142] Succinate dehydrogenase, hydrophobic anchor subunit |
TIGRFAM ID | [TIGR02968] succinate dehydrogenase, hydrophobic membrane anchor protein |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.231416 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGCCG CGACCGGCTC GCACACGGGG ACCGGAACCT GGCTCGTGCA GCGCGCGACG GCGGTCGTGC TCGCGCTGGC CCTGCCGCTC CTGCTGCTGC GCTTTCTCGC CGCGCCGCCG CTCGACTTCG CCGCCTGGCA GGCGCTGCTC GCGCCGCTCT GGCTGCGTCT GCTGATGCTG CTCGCGGCCG GCGCGCTGGC CCTTCACGCC TGGGTCGGCG TGCGCGACAT CCTGATGGAT TACGTCCATG CGACCGGACT GCGCCTGACG ATATATATGG CCGTGATCGG CACCCTGGCG ACGAGTGTCG CGTGGCTCGC CGCGATCCTG TTCGGCCCGG TCTTCGGGCG CGCGGCGTGA
|
Protein sequence | MKAATGSHTG TGTWLVQRAT AVVLALALPL LLLRFLAAPP LDFAAWQALL APLWLRLLML LAAGALALHA WVGVRDILMD YVHATGLRLT IYMAVIGTLA TSVAWLAAIL FGPVFGRAA
|
| |